Alnus glutinosa (common alder): 133851802
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Entry
133851802 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133851802
KO
K07573
exosome complex component CSL4
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133851802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133851802
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133851802
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
133851802
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Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
S1_RRP4
CHASE5
Motif
Other DBs
NCBI-GeneID:
133851802
NCBI-ProteinID:
XP_062144367
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Position
12:complement(15611297..15627613)
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AA seq
197 aa
AA seq
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MEEAGREKEVVTPGEVLGKASDVKAGRGAYVAPHNNLVYASLTGFRRTVSPPPDQDQRPT
VEVTHLKAHGVIPEPGSVVLARVTKVMAKMASADIMCVGPKSVREKFTGIIRQQDVRATE
IDKVDMHLSFRAGDIVRALVLSLGDARAYYLSTARNELGVVSAESTTGATMVPISWTEMQ
CPLTAQIEHRKVAKVGV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgggacgagagaaagaggtggtgacaccaggggaagtgctgggaaaggca
tccgacgtgaaggcagggagaggcgcctatgtggcgccccacaacaacttggtctacgct
tccctcactgggtttcgccgcaccgtctcccctccccccgaccaggatcagagacccact
gtggaagtaactcatctcaaggcccatggtgttattccagaaccgggatccgtggttctt
gcccgagttactaaagtgatggctaagatggcttcagctgatattatgtgtgttggtccc
aagtctgttagagaaaagtttactggcataattaggcaacaagatgttagagcaactgag
attgataaagtggatatgcacttatcttttcgtgctggtgacattgtcagggctcttgtg
ctgtcccttggagatgcacgagcttattatctatcaactgcacggaatgaattgggtgtg
gtgtctgccgagagtacaacaggtgcaacaatggttccaataagttggacagagatgcaa
tgcccattaacagcccaaattgagcacagaaaggttgctaaggttggagtttga
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