Alnus glutinosa (common alder): 133851940
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Entry
133851940 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133851940
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aglu01009
]
133851940
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aglu03041
]
133851940
Protein phosphatases and associated proteins [BR:
aglu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133851940
Spliceosome [BR:
aglu03041
]
Common components
Common spliceosomal components
SR proteins
133851940
BRITE hierarchy
SSDB
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GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
133851940
NCBI-ProteinID:
XP_062144555
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All DBs
Position
12:26356386..26359947
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AA seq
251 aa
AA seq
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MADSPRKRYSRSPSPIRAQSRSRSRSRPRSRSRSWSRPRSRSRSRSWSRPRPRSQSRGRG
RSRSRSHGRSEVVNPGDTLYVTGLSQRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGF
AFVTMENSEDANRCVKYLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLKNTRDYGPRGG
DRGGDRGGDRGRYRGREDYGYRRSPRRSPYRGGRDYSPRHSPPHGGRTRRDRSRSVPYSP
SPERKYARGSR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctcctcgcaaaaggtattcacggtccccttcccctattagagctcagtcc
aggtcccgatctagatctagacctagatccagatccaggtcttggtctagacctaggtct
aggtccagatctagatcctggtccaggccaaggcccagatcccagtccagaggtcgtggc
aggtcaagatccagaagtcatggcaggtctgaggttgtaaaccctggggataccctttat
gtaactggtctctcccaaagggtcacagagagggaccttgaagagcacttctctaaggag
ggaaaggtagcttcctgtttccttgtggtggagcctcgtacgcgtatctcacgtggtttt
gcttttgttacgatggaaaattctgaggatgccaaccgttgtgttaaatatctcaaccaa
tcagttctcgaaggtcgttatataactgtagaaaagtcacggaggaaacgagcgagaact
cctacaccagggcactatcttgggctgaaaaataccagagactatggccctcgtggcggt
gaccgtggcggtgaccgtggtggtgaccgtggtaggtatcgtggacgtgaggactatggg
tatcgtagatctcctaggcgctcaccatatcgagggggtcgtgattattctcccagacac
tcaccaccccatggtggaagaacaagaagggacaggtccaggtcggttccttattctcct
agcccggaaaggaaatatgctcgtggttctaggtga
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