Alnus glutinosa (common alder): 133851976
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Entry
133851976 CDS
T10577
Name
(RefSeq) ATP-dependent DNA helicase Q-like 1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133851976
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133851976
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
133851976
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
WIYLD
APOBEC4_like
APOBEC1
HopW1-1
Motif
Other DBs
NCBI-GeneID:
133851976
NCBI-ProteinID:
XP_062144596
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Position
12:22170080..22177150
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AA seq
627 aa
AA seq
DB search
MDDHDLELERARLLSLALEFGFDEESAKKCLDRLVQLYGEDGRDFITVEHCGDDFLAALA
ESMQDTEEWDDLQAIESEACGTLSSIFDKDVLNSNEADNDDNARSYINVIEDSPEPQKGP
HFLDLDSSSDSEDLDFIIPKKKDVKSTPSSCADWSSPVFMQGSSKCDSKSVDCGSSITPG
LIASVSCKKQCSRTSKEEHKTLSYEELKALDDFELANVIIFGNRTFRPLQHQACKAAVAK
RDCFILMPTGGGKSLCYQLPATMQPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQ
TASQAAAVLQELRQDEPSCKLLYVTPERIAGNSLFLEILKCLHWKGQLAGFVVDEAHCVS
QWGHDFRPDYRGLGCLKQNFPDVPVMAVTATATQSVREDIIKALRIPRALVLERSFDRPN
LKYEVIGKTKEPLKQLGQLLMDRFKNQCGIVYCLSKSECGEVSKFLNEKCNIKTEYYHAG
LVARQRVSVQKKWHMGEIHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGR
DNHPAVCIALYQKKDFSRVVCMLRNGQGYKKESFKRAMAQAHKMQEYCELKAECRRQALL
KHFGESFDRNACKYGSNPCDNCLKTSS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccacgatctggaattggaaagagctcgcttgctaagcttggccctcgagttt
ggtttcgatgaagaatcggcaaagaagtgcctggatcgtctggttcaactctatggcgag
gatggtcgtgatttcatcactgtggagcactgtggtgatgattttcttgcggccttagct
gaatcaatgcaagatactgaggaatgggatgatttgcaagcaattgagtcagaagcttgt
ggaactttgagtagcatttttgacaaagatgttctcaacagtaatgaagcagataatgat
gacaatgcaagaagctacatcaatgttatagaggattcacccgaacctcaaaaaggtcca
cattttctggatttggattcttctagtgacagtgaagacttagacttcataattccaaag
aaaaaagatgtcaaatctaccccttcttcctgtgctgattggagcagtcctgtcttcatg
caaggctcaagtaaatgtgattcaaaatctgtggattgtgggagcagcatcactccaggt
ttaattgcatcagtttcatgtaaaaagcagtgctcccgaacatcaaaagaggaacacaag
actctcagttatgaagaattaaaggctttggatgattttgaattggcaaatgtcataata
tttggtaacaggacattccgaccattgcagcatcaggcttgtaaagcagctgtagcaaag
cgagattgcttcattcttatgcctactggaggtggtaaaagtctatgttaccagcttcca
gcaactatgcaaccaggtgttacggtagttgtatctcctctactttccctcattcaggat
caaataattactctgaacctcaagtttggaataccagcaacttttctgaattctcagcaa
actgcttcccaagcagcagctgtcctccaagagctaaggcaagatgaaccgtcatgcaag
ctcttgtatgtaactcctgaaaggattgctgggaactcattgtttcttgagattctaaaa
tgcctgcattggaaggggcaactagctggttttgttgttgatgaagcgcactgtgtgagc
caatggggacatgattttcgtccagattaccgtggattaggatgtcttaagcagaatttc
ccagatgttccagtgatggcagtgactgccacagcaacccagtcagttcgtgaggacata
ataaaagctttaagaatccctcgcgctctggttcttgaaagaagctttgatagacccaac
ttgaagtacgaagttattggaaagaccaaggagccactgaagcagcttggacagctactg
atggatcgtttcaagaatcagtgtggaattgtatactgcctgtcaaaaagtgaatgtggt
gaagtgtcaaagtttttgaacgagaaatgcaatattaagacagaatattaccatgctggt
ttggtggctcgccaaagagtttctgttcaaaagaagtggcacatgggagagatccatatt
gtatgtgctactattgcttttggaatgggaatagacaaaccagatgttcgatttgtcatc
cacaataccttgtccaaatcaattgaaagctattatcaagaatcaggaagggctggaaga
gataatcaccctgcagtgtgcattgctctataccagaagaaggattttagtcgagtagta
tgcatgttgcggaatgggcaaggatacaaaaaagaaagctttaagagagcaatggctcaa
gctcataaaatgcaagagtattgtgaacttaaggctgaatgtcggagacaagccttactc
aaacactttggagaatcatttgaccgaaatgcctgcaaatatggttctaatccttgtgat
aactgtttgaagacttcctcctga
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