Alnus glutinosa (common alder): 133851993
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Entry
133851993 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133851993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aglu03041
]
133851993
Spliceosome [BR:
aglu03041
]
Common components
Common spliceosomal components
SR proteins
133851993
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133851993
NCBI-ProteinID:
XP_062144626
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All DBs
Position
12:complement(21660022..21665674)
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AA seq
287 aa
AA seq
DB search
MSSRSSCTIYVGNLPGDTRMREVEDLFRKYGPIVDIDLKLPPRPPGYAFVEFEDPRDAED
AIYYRDGYNFDGCRLRVELANGRRGHSSSVDRYSSYSGSRSSRGIPRHSDYRVLVTGLPP
SASWQDLKDHMRQAGDVLFSQVFRDRGGMSGIVDYAHYDDMKYAIRKLDDTEFRNSFSRA
YIRVRDYDSRRSYSRSRSRDSRQSYSRSPVRSPYMSRSPSHSHSYSGRSRSISPKRKYSF
RSPSVSRSRSRSRSRSPVTSPPRHKSRSPSRSIRSLSPSRPPSVRSE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgctcaagctgtaccatctatgttggaaatctccctggtgatactcgtatg
agagaagtagaagatctgtttcgtaagtatgggcctattgttgacattgatctgaagctc
ccaccaagaccgccaggttatgcttttgttgagtttgaagacccacgtgatgctgaagat
gcaatatattaccgggatgggtataactttgatggttgtcgtttacgggttgaacttgca
aatggccggcgaggacattcatcatcagtggatcgctatagcagttatagtggtagtcgc
agtagccgtggtattccgaggcattctgactatcgtgttttggtcactggattacctcct
tctgcttcatggcaagacctgaaggatcatatgcgtcaagctggtgatgtcctcttctct
caagtattccgtgatcgtggtggcatgtcaggaattgtggattatgcacactatgatgac
atgaagtatgctatcagaaaacttgatgacactgaatttcggaattctttttcgcgggct
tacatacgggtgagggattatgattcgagacggagctactctagaagtcgcagccgtgat
tcaagacagagctattcaagaagccctgttcgtagtccttatatgtcaagaagcccaagt
cacagccatagctatagtggcaggagcagaagcatatctccaaagagaaaatattcattt
cgatctccctcagtatctcgttcaagatctcgatcaagatccagatctccagttacttcg
cctcctcgccataaaagtcgaagtcccagcaggagcattagaagcctatcaccctcccgt
ccgccttcagtaagatctgagtga
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