Alnus glutinosa (common alder): 133852074
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Entry
133852074 CDS
T10577
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aglu03041
]
133852074
03009 Ribosome biogenesis [BR:
aglu03009
]
133852074
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133852074
Spliceosome [BR:
aglu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133852074
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
90S particles
Helicases
133852074
Pre-60S particles
133852074
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
133852074
NCBI-ProteinID:
XP_062144731
LinkDB
All DBs
Position
12:complement(20666649..20674220)
Genome browser
AA seq
591 aa
AA seq
DB search
MVEQVEQNHTSPEDETKKKRKRNRHKKNSTAAEQADPQKQEEEVAVEKGEEEKKLKKKKK
REEKDEEEGEGEDGGGGRGEELKEEVAKKKVKSGGGFGIMSTESFESLGLSEPTFKAIKD
MGFQHMTQIQARTIPPLLLGKDVLGAARTGSGKTLAFLIPAVELLHHIHFAPRNGTGVVI
ICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARRGEAERIVKGVNLLVGTPGRLLDHL
QNTRGFIYKNLKCLMIDEADRILEANFEEEMKQILKLLPKNRQSALFSATQTKKVEDLAR
LSFQTDPIFIDVDDGRNKVTNEGLQQGYCVVPSANRFILLYSFLKRNMSKKVMVFFSSCN
SVKFHSELLRYIQVDCLDIHGKQKQLKRTTTFFNFCKAEKGILLCTDVAARGLDIPDVDW
IVQYDPPDEPKEYIHRVGRTARGEGAKGNALLFLTPEELQFLRYLKEAKVPVKEYEFDQK
KLANVQSHLEKLVANNYYLNKSAKDAYRSYILAYNSHSMKEIFNVHRLDLQAVATSFCFS
NPPKVNVNIDSGASKFRRKMRKVDGKRHGFSESTPYGRQGGGDDKRQFARH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaacaggtagagcaaaaccatacctcgcctgaggacgaaacgaagaagaagcgc
aagaggaatagacataagaagaattctaccgccgcagagcaagcggatcctcagaagcaa
gaagaagaagtggcagttgaaaaaggcgaggaggagaagaaattgaagaagaagaagaag
agggaggagaaggacgaggaggagggagagggagaggatggtggtggtggtcgcggtgag
gaattgaaggaggaggtggcgaagaagaaagtgaagagtggtggagggtttggaattatg
agtaccgagtcctttgagtctttgggattatctgaacccactttcaaggctattaaggat
atgggatttcagcatatgacccagattcaagccagaacaatcccaccacttttgcttggc
aaagatgttcttggagctgcaaggacaggttctggtaaaactcttgcttttctaatacca
gctgtggagttgttacatcacatccattttgctcctcgtaatggaacgggagtggtcata
atttgcccaacaagggagcttgcaatacagacccatgctgtggcaaaagaccttctcaag
taccactctcagactcttggtttggttattggtggttcagctagaagaggagaagcagag
cgtattgtgaaaggagtgaatttattagtaggaacccctggtcgacttcttgaccatctg
caaaataccaggggattcatttataaaaacttgaagtgcctaatgatcgatgaagctgac
aggatactggaagcgaactttgaggaagaaatgaagcagattcttaagcttctaccaaag
aataggcaatcggctttattttcagccacccaaactaagaaggttgaggatcttgcacgc
ttatcatttcagacagatcctatctttattgatgtggatgatggaagaaataaggtcacc
aatgaagggctgcagcaaggctattgtgttgtgcccagtgccaatagatttattcttctg
tattccttcttgaagaggaatatgtcaaagaaagtgatggtcttcttctcttcatgtaac
tcagtcaaattccattctgagctgctgagatatattcaggtggattgccttgatatccat
ggaaagcaaaagcagctgaaaaggacaactacgttttttaacttctgcaaagcagagaag
ggaatcttgctatgtactgatgttgctgctcgtggacttgatattcctgacgtggactgg
attgtgcagtatgatcctccggatgaacccaaggaatacattcatagggttggccgaaca
gctcgcggggaaggtgcaaaaggaaatgcgctgcttttccttactcctgaagagttgcaa
tttcttcgctatctgaaggaagcaaaagtccctgttaaagagtatgaatttgatcaaaag
aagctggctaatgtgcagtctcacctggaaaagctggtagccaataactattacttgaac
aagtcggctaaagatgcatacagatcctacatattagcatataactctcactctatgaaa
gaaatctttaatgttcaccggcttgatctgcaggctgttgctacttctttctgtttttcg
aacccaccaaaggtgaatgtgaacatagatagtggtgcctcaaagttcagaaggaaaatg
cggaaagttgacggaaagcgacatggtttcagtgagagcaccccttacggaaggcaggga
ggtggagatgataagcgacaatttgcgaggcattag
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