Alnus glutinosa (common alder): 133852358
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Entry
133852358 CDS
T10577
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133852358
Enzymes [BR:
aglu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
133852358
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
133852358
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
133852358
NCBI-ProteinID:
XP_062145083
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Position
12:25748861..25753833
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AA seq
625 aa
AA seq
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MKIVTYNVNGLRSRISQFGSLQKLLNSFDADIICFQETKLRRQELTADMAVAEGYESFFS
CTRTSDKGRMGYSGVATFCRVKSAFSSNEVALPIAAEEGCTGLVGNSQNGKGEACEAAEG
LEGEFEKDELLKVDSEGRCVITDHGHFVLFNLYGPRAECDDIERIRFKLTFFKILQKRWE
ALLLQGRRIIVVGDLNIAPTVMDRCDAGPDFEKNEFRRWFRSMLVESGGSFTDVFRTKHP
DRREAYTCWPQNTGAEQFNYGTRIDHILCAGSCLHQQHDLQGHDFMTCHVNECDILTQYR
RWKPGNTLRWKGGRSIKLEGSDHAPVFTRFLEIPDISEHSTPSLSARYIPMIHGVQQTLV
SVLTKRQLAEQIKSCEMSSSLSNENITIEICNEGVKKSFDNCSISGMSPVECCSSSKQEY
EGLISNTDEHSRGFAAGAGAACNTLIKSGSECSKSMPSHETKKKARKSQWSQLSLKSFFQ
RSPNISSSADDSNTDFLISQADVPESGNHSNETPVVDVHFSSSQQYALNSSAYTQDQHES
NSCSLEKDKTNAALLEWQRIQQVMQNSIPLCKGHSEQCVARVVKKQGPNSGRRFYVCARA
EGPASNPEANCGYFKWAGSKSRHKR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacgtacaacgtgaacgggctgagatcacgcatttcgcagttcggatcc
ctccagaaattgctcaattccttcgacgccgatatcatctgctttcaggagaccaagttg
agaaggcaggagctaacggcggacatggcagtggcggagggatacgaatccttcttctcg
tgcacccgcacgtctgataaaggtcgaatgggctattctggtgttgctacgttctgtcgc
gtaaagtcggcgttttcgagcaacgaagtagccctgccgattgcggcggaggagggctgc
acaggacttgttggaaactctcagaatggaaaaggcgaagcgtgtgaagcagcggaaggc
cttgagggggagtttgagaaagatgagctgcttaaggttgacagcgaggggcgttgtgtt
atcacagatcatggccattttgttctttttaacctgtatggacctcgagctgaatgtgat
gatatagaaaggatccggttcaagcttacatttttcaagatcttacagaaaagatgggag
gctctcctgcttcaaggaaggaggataattgttgttggtgatctcaatatcgcacccaca
gtaatggatcgttgtgatgctggaccagatttcgaaaagaatgaattcagaagatggttt
agatctatgctagtggaatctggaggctcttttactgatgtttttagaacaaagcatccg
gatagaagagaagcatacacatgctggccacaaaatacaggcgctgaacaatttaactat
gggaccagaattgaccatattctatgtgcgggatcatgcttacatcaacagcatgacctg
caaggccatgactttatgacttgccatgttaatgagtgcgacatactgacacagtacaga
cgatggaaacctggaaatacacttaggtggaaaggagggcgaagcatcaaactggaaggt
tctgatcatgctcctgtttttacaagatttctggaaattcctgatatttctgaacatagt
actccaagtttatctgctagatatattcccatgattcatggcgttcagcaaactcttgtg
tcagtcttaacaaaaaggcaacttgctgaacaaattaaatcctgtgagatgtcaagttca
ctttcaaatgaaaatatcacaatagagatttgcaatgagggagtgaaaaaatcattcgac
aattgcagtatatctggcatgtcccccgttgaatgttgttcttcttcaaagcaagaatat
gaaggtctcatttctaataccgatgagcattccagaggtttcgctgctggtgctggtgct
gcttgtaacaccttgattaagtcaggaagtgagtgtagtaaatcaatgcccagccatgaa
accaagaaaaaagcaagaaaaagtcaatggtcccaactctcactgaaatcatttttccag
agaagtccaaacattagcagtagtgctgatgactctaacactgattttttaatcagtcag
gcagatgtcccagagtctggtaatcactccaatgaaactcctgtggtggatgttcatttc
agcagttcccagcagtatgcgttgaattcaagtgcatacactcaggatcaacatgaatca
aattcctgttctttggagaaagacaaaactaatgctgctttactggagtggcaaaggata
cagcaagtcatgcagaatagtattcctctttgcaagggccatagtgaacaatgtgttgca
cgggtagtgaagaaacaaggccctaactctggtcgcagattttatgtctgtgcacgagct
gagggacctgcatctaatcctgaagcaaattgcggttacttcaaatgggctggctcaaaa
tctcggcacaaacgatga
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