Alnus glutinosa (common alder): 133854053
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Entry
133854053 CDS
T10577
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133854053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133854053
03036 Chromosome and associated proteins [BR:
aglu03036
]
133854053
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133854053
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133854053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
133854053
NCBI-ProteinID:
XP_062146065
LinkDB
All DBs
Position
13:complement(203620..212483)
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AA seq
1009 aa
AA seq
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MFSSTNPFGQSSSSPFGSPSVFGQTNNASNNPFAPKPFGSSTPFGSQTGGSLFGGTSTGV
FGAAPSSSPFSSTTTFGASSSPAFGSTVPAFGASTPAFGSSSSSFGGSSVFGQKPSFGGF
GSSPTQTSPFGSTNQQSQPAFGSSIFGASTPFGATSQSAFGASSTPAFGATSTPAFGSTN
STPAFGATSTPTFGATSTPAFGATSTPAFGATSTPAFGSTASPAFGNTGTSFGVSNAPVF
GSGGAFGASSSPIFGTSTAPAFGTSSTSAFGSSSTSAFGAGSTPAFGASSTPSFSFGSSP
AFGQSASTFGSSPFGTTAPFAAQSSQFGAQSTTPAFGSTGFGQSPFGSQRGGSRVAAFTP
TTEADGGKLESISAMPVYKDKSHEELRWEDYQIGDKGGPLPAGQPAGGIGFSSSPANSNP
LAPSPTFTQSAASPFSTSVPSNPFAPKTPSIGGLNFGSSSTPAFNSSPFGASTSSGLFGS
TSLPTSSTFGVGSSPSIFGSSPLFSSSQATNAGFGSNTQSSPLFQSNAPSIGQAGSAFGQ
TTTSFGQNPSSPFGQGILGASTTPGFGVNTFSSTSSLISSSNALGFGQSNPSFSIPFQPS
QPAQTTTAFGLGSFGATQPAGGSPFGGMPGILGQSNIGQLSAPQSSAVVQPVPATNPFGT
LPAMPQMSIGRVGTAPSIQYGISTLPVVDKPAPVRISSLLTSRHLSQRRIRLPARKYHTK
NDGPKVPFFSDDEEPSTPKADALFIPRENPRSLVIRPAEQWPMRASAEKASASKDLSSPV
HENGKISQEAQGGSNSEDKDKNPVENGFAKEGVHILKGNHKPNGVHEEHSVQKGDSYMTL
SGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRHVKDFVVGR
HGFGSIKFLGETDVRRLDLEALVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCF
DKKTGKQYTEGPKIEKYKEMLKRKAEDQGAEFVSYDPIKGEWKFRVNHF
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttcgactaacccttttgggcagtcatctagtagcccatttgggtctccatca
gtctttggacagaccaacaatgcaagtaacaatccttttgctccaaagccctttggtagt
tctaccccttttggttcacaaactgggggttctttattcgggggtacttcaactggagtg
tttggtgcagccccatcttcttcacctttctcttccaccacgaccttcggtgcttcatcg
tctccggcttttggaagcacagtgcctgcttttggagcatctactcctgcatttggtagt
tcatcatcatcatttggtggatcttccgtctttggtcagaagccttcttttgggggcttt
gggtcctctcctactcaaacaagtccctttggaagcacaaatcaacaatcacagccggca
tttgggagtagcatatttggtgcctccacaccatttggtgcaacaagtcagtctgcattt
ggtgcaagtagcaccccagcttttggtgctacaagcacccccgcatttggttctacgaac
agcacgcccgcatttggtgctaccagcacgcccacatttggtgctaccagcacgcccgca
tttggtgctaccagcacacccgcatttggagctaccagcacccctgcctttggttcaacc
gcaagtcctgcatttgggaatactgggacgtcatttggtgtgtcaaatgctcctgtattt
ggatctggcggagcatttggagcttcaagcagccctatatttggtacttcaactgctcca
gcatttggtacatcaagcacttctgcatttggttcttcaagtacttctgcattcggtgcc
ggaagtactcctgcttttggggcttctagtacaccgtccttcagctttgggtcctctcca
gcttttggccaatcagcttctacatttggtagcagcccatttggtaccactgctcctttt
gcagcccagagttctcaatttggtgcccagtctacaacaccagcatttggcagcactggc
tttgggcagtcaccttttgggagtcaacgtgggggaagcagagtagctgccttcacacca
acaactgaagcagatggtgggaagttagagtcaatatctgccatgcctgtctacaaagat
aaaagccatgaggagctgagatgggaggactatcaaataggtgataaaggtggaccactt
cctgctggtcagcctgctggtgggattggctttagttcgtctcctgcaaattcaaatcct
cttgctccttccccaacatttactcaatcggctgcgagtcctttctctacctcagtgcct
tctaacccatttgctccaaaaactcccagcattggtggtttaaattttggatcctcaagt
actcctgcattcaattcttcacctttcggtgcatcaacttcatctggcctttttggatca
acatctttaccaacatcatctacatttggtgttggttcatctccatctatttttggttca
tcgcctctcttcagttcttctcaagcaacaaatgcaggatttggtagtaacactcagtca
tccccattattccaatctaatgcaccttcaattgggcaggcaggctctgcttttggtcag
actactacttcctttgggcagaatccaagttcaccctttggtcaaggaatacttggtgct
tctactacccctggatttggggtaaacactttttcgagcacttcatcacttattagttca
agcaacgcattaggtttcggtcaatcaaatccttctttttcaataccttttcaaccatca
caacctgctcagacaactactgcttttggccttggcagttttggtgcaacacaaccagct
ggtggaagtccctttggtggaatgccaggcattttgggtcagagtaacatcggacaattg
tctgctcctcagagctctgctgttgtacaaccagtacctgctacaaatccatttggaaca
ctcccggcaatgcctcaaatgtcaattggtcgagttggaactgcaccttcaattcaatat
ggaatctctacattgcctgttgttgataaacctgcacctgttagaatatcatccttattg
acttctcgacacctgtcacaaaggcggattaggttgcctgcaaggaaatatcatactaag
aatgatggtccgaaggttccattttttagtgacgatgaagagccgagcacaccaaaggca
gatgctctttttattcctagggaaaaccctagatcactggtcattcgtcctgcagagcag
tggcctatgagagctagtgctgagaaagcatctgcatcgaaggatctatctagtccagtg
catgagaatgggaaaatttctcaagaagctcaaggtggctccaactctgaagataaagat
aaaaatccagtggaaaatggttttgccaaggaaggtgttcatattctcaaaggcaaccat
aaaccaaatggagttcatgaagagcattctgttcagaaaggggattcttatatgacactc
agtggacacagagccggtgaggctgccatagtttatgagcatggggctgacattgaggca
ctgatgccaaagctgcgacgttcagattactacacggagcctcgaatccaagaacttgca
gctaaagaaagggctgagccagggttctgccgccatgtgaaggactttgtggttggacgt
catggtttcggcagcataaaattcttgggtgagacagatgtgcggcggcttgatcttgag
gctcttgttcagtttaacaatcgtgaggtgatcgtgtacatggatgacagcaagaaacct
cctgttggacaaggtctaaataagccagccgaggtaacgcttctcaacataaaatgcttt
gacaagaagactggaaagcagtatacagaagggcccaaaattgaaaaatacaaggagatg
ctcaagaggaaggcggaggaccaaggtgccgagtttgtgtcttacgaccccattaaagga
gagtggaagttcagagtcaatcacttctga
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