Alnus glutinosa (common alder): 133854101
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Entry
133854101 CDS
T10577
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133854101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133854101
03036 Chromosome and associated proteins [BR:
aglu03036
]
133854101
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133854101
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133854101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
133854101
NCBI-ProteinID:
XP_062146117
LinkDB
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Position
13:complement(217081..242063)
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AA seq
946 aa
AA seq
DB search
MFSSTNLPAFGASTPAFGSSSSSIGGSSVFGQKPSFGGLGSSPTQTSPFGSTNQQSAPAF
GSSIFGSSTPLGAISQSAFGASSTPAFGATSTPAFGSTNSPAFGATSTPAFSCTSTPAFG
STASPAFGNTGTSFGASNAPLFGSGGAFGASSSPIFGTSTAPAFGTSNAPAFGSSSPFGS
TNQQSPPAFGSNIFGASTPLAATSQSAFGASSTQAFGATSTPAFGSTNSPAFGATSIPAF
GATSTPAFGATSTPAFSCTSTPAFGSTASPAFGNTGTSFGASNAPVFGSGGAFGASSSPI
FGTSTAPAFGTSNSPAFGTSNSPAFGTSSTPAFGSSSTSAFGSASTPAFGASSTPSFCFG
SSPAFGQSASAFGSSPFGATAPFAAQSSQFGAQSTAPAFGSTGFGQSPFGSQRGGSRVAA
FTPTTEADGGKLESISAMPVYKDKSHEELRWEDYQIGDNGGPLPAGQPAGGIGFSSSPAN
SNPLTPSPTFTQSAASPFSTSVPSNPFAPKTPSIGGLNFGSSSTPAFNSSPFGSTVFCQK
PSFGGFGSSPTQTIPFGSTNQQSQPAFGSSIFGASTPFGATSQSAFGASSTPAFGATTTP
AFGSTNSPHLVLPACPHLVLPAHSHLLVRAPLPLVQQQVLHLGIQGRHLVCQMLLYLDLA
EHLELQAALHLALQPLQHLVLQLLQHLVHQALLHFGSSSTYAFGAASSPAFGASSTPSFS
FGSSPAFGQSASAFGSSPFGTSAPFAAQSSQFGAQSTPPTFGSTGFGQSPFGSQRGGSRV
AAFTPTTEADGGKLKSISAMPVYKDKSHEELRWEDYQIGDKGGPLRAGQPAGGIGFSWSP
ANSNSLAHSPTFAQSATSPFSTSVASNPFTPKTPSIGGLNFGSSSTAFNSSPFGASTLSG
LFGSISLSTSSTFGVGSSPSIFGSSPLFSSSQATNAGFGSNTQSSP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttcgactaacctgcctgcttttggagcatctactcctgcatttggtagttca
tcatcatcaattggtggatcttctgtctttggtcagaagccttcttttgggggccttggg
tcctctcctactcaaacaagtccctttggaagcacaaatcaacaatcagcaccggcattt
gggagtagcatatttggctcctccacaccattaggtgcaataagtcagtctgcatttggt
gcaagtagcaccccagcttttggtgctacaagcacccctgcatttggttctacgaacagc
cctgcatttggtgctaccagcacgcccgcattcagttgtacgagcacccctgcctttggt
tcaacagcaagtcctgcatttgggaatacagggacgtcatttggtgcatcaaatgctcct
ttatttggatctggcggagcatttggagcttcaagcagccctatatttggtacttcaacc
gctccagcatttggtacttcaaacgctccagcatttggttcttcaagtccctttggaagc
acaaatcaacaatcaccgccggcatttgggagtaacatatttggcgcctccacaccatta
gctgcaacaagtcagtctgcatttggtgcaagtagcacccaagcttttggtgctacaagc
acccccgcatttggttctacgaacagccctgcatttggtgctaccagcatacccgcattt
ggtgctaccagcacgcctgcatttggtgctaccagcacacccgcattcagttgtacgagc
acccctgcctttggttcaacagcaagtcctgcatttgggaatacagggacgtcatttggt
gcatcaaatgctcctgtatttggatctggcggagcatttggagcttcaagcagccctata
tttggtacttcaaccgctccagcatttggtacttcaaactctccagcatttggtacttca
aactctccagcatttggtacatcaagcactcctgcatttggttcttcaagcacttctgca
ttcggttccgcaagtactcctgcttttggggcttctagtacgccgtccttctgctttggg
tcctctccagcttttggccaatcagcttctgcatttggtagcagcccatttggtgccact
gctccttttgcagcccagagttctcaatttggtgcccagtctacagcaccagcatttggc
agcactggctttgggcagtcaccttttgggagtcaacgtgggggaagcagagtagctgcg
ttcacaccaacaactgaagcagatggtgggaagttggagtcaatatctgccatgcctgtc
tacaaagataaaagccatgaggagctgagatgggaggactatcaaataggagataatggt
ggaccactccctgctggtcagcctgctggtgggattggctttagttcgtctcctgcaaat
tcaaatcctctcactccttccccaacatttactcaatcggctgcgagtcctttctctacc
tcagtgccttctaacccatttgctccaaaaactcccagcattggtggtttaaattttgga
tcctcaagtactcctgcattcaattcttcacctttcggatctaccgtcttttgtcagaag
ccttcttttgggggctttgggtcctctcctactcaaacaattccctttggaagcacaaat
caacaatcacagccggcatttgggagtagcatatttggcgcctccacaccatttggtgca
acaagtcagtctgcatttggtgcaagtagcaccccagcttttggtgctacaaccaccccc
gcatttggttctacgaacagcccgcatttggtgctaccagcatgcccgcatttggtgcta
ccagcacactcgcatttgctggtacgagcacccctgcctttggttcaacagcaagtcctg
catttgggaatacagggacgtcatttggtgtgtcaaatgctcctgtatttggatctggcg
gagcatttggagcttcaagcagccctacatctggcacttcaaccgctccagcatttggta
cttcaactgctccagcatttggtacatcaagcactcctgcattttggttcttcaagcact
tatgcattcggtgccgcaagttctcctgcttttggggcttctagtacgccgtccttcagc
tttgggtcctctccagcttttggccaatcagcttctgcatttggtagcagcccatttggt
accagtgctccttttgcagcccagagttctcaatttggtgcccagtctacaccaccaaca
tttggcagcactggctttgggcagtcaccttttgggagtcaacgtgggggaagcagagta
gctgccttcacaccaacaactgaagcagatggtgggaagttaaagtcaatatctgccatg
cctgtctacaaagataaaagccatgaggagctgagatgggaggactatcaaataggtgat
aaaggtggcccacttcgtgcaggtcagcctgctggtgggattggctttagttggtctccc
gcaaattcaaattctcttgctcattccccaacatttgctcaatcggctacgagtcctttc
tctacctcagtggcttctaacccatttactccaaaaactcccagcattggtggtttaaat
tttggatcctcaagtactgcattcaattcttcacctttcggtgcatcaactttatctggc
ctttttggatcaatatctttatcaacatcatctacatttggtgttggttcatctccatct
atttttggttcatctcctctcttcagttcttctcaggcaacaaatgctggatttggtagt
aacactcagtcatccccataa
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