Alnus glutinosa (common alder): 133854996
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Entry
133854996 CDS
T10577
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133854996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133854996
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
133854996
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
133854996
NCBI-ProteinID:
XP_062147274
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Position
13:24843936..24850921
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AA seq
1316 aa
AA seq
DB search
MMDYSLPVARRTRQGQALIFKQYNEEKKKGKERKGREQNNGVESVSSSGRGRANGEELAE
MVKGVSGSDRLGANHRIETESETVAVSDSSVEEIGGNDWGEEGSGVGEESMGLKNNENSN
MGFEGMVHVDEIVVDDSEDDEVVFLGEGDMNCSSLRSGAERDEGVVYIDVDDGDVLSGED
VNNPSGLNSDGRRGSDEMAPSLTRKGESSCLNFDYRKSSGVVGRTLGFLKRNEDEDGGND
AVWGKSYASERNKDEHGDDNVVLDGLRRNEDDDGGGKDVSVDSVGTETSLESSSSEEGSD
DEDYNVGKLESCGESSSSEEASDDEDYKGEKLGCCGGCQQLSSDSRVEEEKTEEDAEGRE
IMKGGSRKRGRPKGVDVGLKRRKYGLDILVDSENEEDSINDDEDGSLNISHELYCVAQRT
RSKKKKKKKKKMEAGTFSHPLCIDEEEVESSSGHDDSDDSGDDIVGSEEYWSNYENEDNF
SDDEPYHGSKKTLSCSGKFKTNKGYDDECVQKVHVRDEGKLRMSCSGKFKTNKGYDDECV
QKVHVRDEGKLRTATKGKSIDLVKNCNALKILVDSILEKGEVPLEELESSKDDACKDENY
SAVAKMSLPLKFTFGVVESNPSKKSEDQKEMDGLWADFELALICSEIGSVDPAKVEDEDS
LPPKNGFDRATLCHVGNHELILDEQVGLRCAFCSYIKMEIKYILPSFSTHPCGKSDRRDP
GGEMNHSIFDDLWPQDSGCDSHSVYDRQAHSEATVWDIIPGIKSSMYPHQRDGFEFIWKN
IAGGIYLDKLKNQTTTSGGSGCIISHAPGTGKTRLTIVFLQTYMKLHPTCRPVIVAPLSL
LLTWEEEFRKWKFDIPFHNLNQSKLSGKESLTNIMEDNLSLNQGGHLDQSVIRLLKVYSW
KLNSSILGISYNLFGQLAGTALFREVLLEVPGIVVLDEGHIPRNLGSLILKALSNIKTDK
RIILSGTPFQNNFDELYNTLCLARPEFTRIRGKWESLTSPITKGTNDRRLKSENLKKVRD
MIDPFVHVHKGSILQEKLPGLRDSLVILQPTQLQKSLFGELSQHITRSHSNHLNHFKSDF
LKSLISVHPSLLLKCGEEEFPSERDRLKGLNHEAGVKTNFLVELIRLSKALNEKVLVFSQ
YLEPLTFIMDQLKFLFNWTEGNEVLYMHGHLEAKQRQSSINIFNDPTSEAKVLLASIKAC
SEGINLVGASRVVLLDVVWNPSVERQAISRAHRLGQEKVVYIYHLIATGTNEEEKYCRQV
EKDLLSELVFSSSGGSGDQQKISPLVSDDKILEEMVQHEKLRHIFEKIQQKESKLI
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgatggactatagcttgcccgtagcgaggaggaccaggcaagggcaagccctaattttc
aagcagtataatgaggagaagaagaaggggaaggagaggaaggggagggagcagaataat
ggggttgagtcggtcagttcgagtgggcgtggtagggctaatggggaggaattggctgag
atggttaaaggggttagtgggtccgatagattaggggctaatcatagaatagagactgaa
agtgagactgttgcggtgtctgatagtagtgtggaagagattggtgggaatgattggggt
gaagaaggcagtggcgtgggcgaggagagtatggggttgaagaataacgaaaattctaat
atgggttttgagggaatggtccatgtggatgaaattgtggtggatgatagcgaggatgat
gaggtggtatttttgggtgaaggggacatgaattgttcaagtctgagatcaggggcggag
agagatgagggtgttgtttatattgacgttgatgatggggatgttttgagtggggaagat
gtgaacaacccaagtggtctgaattctgatgggaggaggggtagtgatgaaatggctcca
tccttgacaagaaagggtgagagtagttgcttgaattttgattataggaagagtagtggt
gtggtgggcaggactctaggatttttgaaaaggaatgaagatgaggatggtggcaatgat
gctgtgtggggtaaatcttatgcttcggaaagaaataaggatgagcatggtgatgacaat
gttgttttggatgggttaagaaggaatgaggatgatgatggtggtggcaaggatgtttcg
gttgattcagttgggacggagacatccttggaatcatcctctagtgaagagggcagtgat
gatgaggattacaatgtgggaaaattggaaagctgtggggaatcatcctctagtgaagag
gcaagtgatgatgaggattacaaaggggagaaattgggatgctgtggcggttgtcagcaa
ttgagttcagatagcagggttgaagaggagaagacagaggaagatgctgaggggagagag
attatgaagggaggaagtcgtaagaggggaaggccaaaaggagttgatgtggggttgaag
aggaggaaatatggattggatatcttagttgattcagagaatgaggaagacagcattaat
gatgacgaagacggttctttaaacatcagtcatgagctttattgtgtggcacagagaacc
cgttcaaagaaaaagaaaaagaaaaagaaaaagatggaggctggaactttcagtcaccca
ttatgcattgatgaggaggaagtggagtcttcatccgggcatgatgacagtgatgatagc
ggggatgatattgttggcagtgaggaatattggtctaattatgagaatgaagataatttt
agtgatgatgagccttatcatggtagtaaaaaaactctgtcctgtagtgggaaatttaag
actaacaaaggttatgatgatgaatgtgtgcagaaagtacatgtgagggatgaagggaag
ttgaggatgtcctgtagtgggaaatttaagactaacaaaggttatgatgatgaatgtgtg
cagaaagtacatgtgagggatgaagggaagttgaggacggccaccaagggaaagagcatc
gacttggtgaaaaactgtaatgctttgaagattcttgtagattccattttggagaaggga
gaagttccattggaagagttggaatcttctaaagatgatgcttgcaaagatgaaaattat
tcagccgttgccaagatgtctctacctttgaagttcacttttggtgttgtggagtcaaat
ccatcaaagaaatcagaagaccagaaagaaatggatggactttgggctgactttgagttg
gctctcatatgtagtgaaattggttcagtcgatcctgctaaggttgaagatgaagattcc
cttcctccaaagaatggctttgatagagctaccctttgtcacgtgggtaatcatgagctt
attcttgatgaacaagttggactaagatgtgcattttgctcctacatcaaaatggagatc
aagtatattctaccatcttttagtacacatccttgtggaaaatcagacaggagagaccca
ggtggtgaaatgaaccactccatctttgatgacctatggcctcaagattctggttgtgat
tcccattctgtctatgatcgccaagctcattctgaagccactgtgtgggacatcattcct
ggtataaaaagtagtatgtacccgcatcaacgtgatggttttgaatttatttggaagaat
atagctggaggaatttatcttgataagttgaaaaatcaaacaacaacttctggtgggagt
gggtgcattatatctcatgctcctgggacggggaagacccgtctaacaattgtttttctc
cagacatacatgaaattacatccaacatgcaggccagtcattgtagctcctcttagcttg
ctccttacctgggaagaggagtttcgaaagtggaagtttgacattccttttcacaatttg
aaccagtcgaagttgtctggcaaggaaagtctcacaaatatcatggaagataacctctcg
ttgaatcaaggtggacacctggaccaaagtgttatccgtttgttgaaggtgtattcctgg
aaattgaatagtagcattctgggaattagttacaatctgtttggacaacttgctggcact
gctctgttcagggaagtgcttcttgaggttcctggcattgttgttcttgatgaagggcac
attcctcgcaatttgggtagtcttatcctgaaggctttgtcaaatatcaaaactgacaag
cggattattctttcaggaactccttttcaaaataattttgatgagctatataacactctg
tgcttggcaaggccggagtttacaagaataagaggcaaatgggagtctcttacgagtccc
atcaccaaaggcacgaatgacagaagattgaaaagtgagaatctgaagaaggttagagat
atgattgacccatttgtgcatgtacacaaaggttcaatactacaagaaaaacttcctggg
ttgagggactctctggtcatattacagccaacccaactgcagaagagcctctttggtgaa
ctctctcaacatattacacgatcccattctaaccatttaaaccattttaaatctgatttt
ttaaagtctttgatctctgtccatccttcactgttgcttaagtgtggggaagaggagttt
ccttctgagagggataggttaaaaggattgaatcatgaggctggagtcaaaacaaatttt
ttagtggaactcatccggcttagcaaggctttgaacgaaaaagttttggtttttagtcaa
tatcttgaaccgttgacctttataatggaccagcttaaatttcttttcaattggaccgag
gggaatgaggtgttgtatatgcatggacatctagaagcaaagcagcgccaatcctcaatt
aatattttcaatgatccaactagtgaagcaaaggtattacttgcgtccataaaggcttgt
tctgaaggtataaatctggttggggcttctagggtcgttttactggatgtggtatggaat
ccatcggtggaaaggcaagccatatcccgtgcacataggctaggccaggaaaaagttgta
tacatctaccatctcattgccactgggacaaatgaagaggagaaatattgtcgacaagtt
gagaaggacttgttgtctgagttggtattctcttcttcgggcggtagtggtgatcagcag
aaaatctcacctttagtctctgatgataaaattttggaagagatggttcaacatgagaaa
cttagacatatttttgaaaagatccaacagaaagagtctaaactgatttga
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