Alnus glutinosa (common alder): 133856603
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Entry
133856603 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133856603
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aglu03009
]
133856603
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133856603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
HEAT_EF3_N
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
133856603
NCBI-ProteinID:
XP_062147644
LinkDB
All DBs
Position
14:22735072..22768267
Genome browser
AA seq
2712 aa
AA seq
DB search
MATPSHAQAVKSLNKSPGRRRFVFRTFSQRVEEIDIDVFRNLDKVKADPSEGSSFFRDCL
MEWRELNTAEDFISFYEEMLPLVQTLPLVLLHKELILSKLLSRLQMKARLSLEPILRLIA
ALSRDLLVDFVLFLPRIADSLVFLLESGVDREPEIIEQIFTSWSYIMMYLQKYLIRDLVY
VLKVTVKLRFYPKDYVQEFMAEATSFLLRNAQDEQLQDGIKKIMIEVMKKPLPARKFGAS
TLLFYVLRGASSRFHSKAKRVLRLLMDSTILGSDSVVEVVITAFRRLCEEIEPKELDLIS
KCLYQKINDCVTNGCILHLSRLLSLLISIVQIHNGRKFYDYQSLLEHVGFLVQIFVMSSG
FGKAEVPETEVIDKVLELMICILNGLHNFNNMPAISSCSLQWAPVFTLRNSSLLTFIKEL
LQKDPCIVYVFAVNILSAMKNLIKTSQEEVIYLLLSFFDVIEVNGQEPNFLDGMKSLIET
SQEEVIYLLLSSFEVMEVKVQEPNFLDGTFGKEFPKMQEAISRWIREINVIVHGDPSSSH
IPETKLALLWGIIRCLPHMINFQERSSCIMNLIDALDQLPLTEDGCLAGLPKQAWQSVLG
AALSSYNKSHNAEKSGPEETSKFLHLAKRYRSSSQVLSAVADYLDSVYGPTSEANSCNRK
YHPELSVENAVDALSIFADNLHHSNRGMRVSTLKILCHHELLSCVDSTNDQSVEKQMKTE
VSQTSLVDSHGNNVLQLLLSIEETPLSISTSRKVILLISRIQMNLSAGRVPQAYAPLVLS
GIVGILNNRFSYLWNPALECLGVLMSQHARLVWDDFVRYLEQYQSMFHTSPELDRGNSKL
YDESSDLVHRFRSFVTPESDSTPCATVLSLLLQSLQKIPNVIESQSLELIDLFSKFLGYK
LNDPVSACKGKEWKVVLKEWLNLLRSMRNLRSFYQSQYLKEVLQNRLLDDNDAEIQMKVL
DCLLIWKDDFLLPYDQHLKNLISSKYLREELTTWSLSKESNQIEEEHRAYLVPIVIRLLM
PKVRKLKTLASRKNASVHLRKAVLGFIAQLDVEELPLFFALLINPLQISSKETDSTSWTS
WENSMDQFRAYNFLKYFTVDNIIALSWKKRYGFLHVIEDVLGVFDEFHLRPFLDLLMGCV
VRVLGSCTSSIDVAKCNGVSSLEDHSNADLTVLEKDSASASDVRTSSAVKQFKALRSLCL
KIVSLVLNKYEDHEFGCEFWNLFFASVKHLVDGFKQEGSSSEKPSSLFSCFVAMSRSHKL
VSLLSREKNLVPDIFSILSVTSASKAIVSCVLTFVENLLNLDSELNDEEDSTKIVLLPNL
EALICSLHCLFQSDSAAKRKLVKCPGEREIRIFKLLSKYIKDPLLATKFVDILVPFITER
AKNCDLYSEAVQVIRDIVPMLGSHSTKKILTAVTPLLASVELDMRLSICDLLDSLAEADP
SVQCLAKIVRKLNATSTTEMGSLDYDAIVDGYNEICIDFFYTVPEDHALVILSHCVYDMS
SEELISRHSAYGSLLSFVEFSAQILGQEGKGHQEITCKMITHDDGCWTRASIQRVTIKFL
LKHMGDALSRETTVKKEWINLLREMLMKLPEVANLNSLRALCSNDAEVDFFNNIVHLQRH
RRARALSRFRNVISTSNMSEDILNKVFVPLFFSMLFDKREGNGEHVRVACIEALASVSGH
VEWKSYYALLVRCLREMTRNPDKQKHLLRLTCSILDKFHFSEIHNNQKANDSVENASDAR
TIGSCSSTMVTEIQRCLHKTVLPKIHKLLNSDSDKVNVNINLAALKLLKLLPGDIMDSLL
PSIIHRICNFLKNRLESIRDEARSALAACLKELGLQYLQFIVGVLRATLKRGYELHVLGY
TLNFILSKSISIPSSGKLDYCLEDLLSVVENDILGDVAEEKEVGKIASKMKETKMRQSFK
TLELIGQSITFKTHALKLLSPVTTHLQKQLTPKVKTELEKMLTHIAVGIERNPSVDQTDL
FIFVYGLIEDGIKHENGQREHSLVAEAKKHHRKDLREKRITSGRLVNVSSHLLIVFALRM
LHKRTTSLKQGKIEHVLSMLDPFVTLLGSCLASKYEDILSASLSCLTSLVRLPLPSLESQ
ADKMKEAVFDIAHSSVTSSSPLMQSCLRLLVVLLRSTSITLSSDQLHQLIQLPLFVDLER
EPSNLALSLLKAIVNRKLVVPEIYDLVTQVGELMVTSQVDSIRKKCSQILLQFLLDYQLS
VKRLQEHLDFLLSNLRYEHSSGREAVLEMLHAIIVKFPSKNVDEQSQTLFVHLVVCLAND
EDNRVRSMTGAAIKKLIGCVSSHSLHSILEYTLSWYSEETQQLWSAAAQVLGLLVEVMKK
KFQIHVNRVLPVTRKILQSAISRQLDVSEETAVAFWKEAYYSLVMLEKMLHQFRDLCFES
DLEEIWEAICELLLHPHMWLRHISSRLIALYFARVIEAQKENEEKAFGTYFLMKPSRLFL
IAASLCCQLKTQLTDDAASNLITQNIVFAICGVHSLMGQMEYVDSPKFWSTLEQHEQGRF
LKSFELLDSRKGRSMFLSLSSGVCNQKEQAQSKDIRYLIISYLLKRMGKVSLQMEAIQMK
IVFNSFSKISLEISQDNCLHYASQMLQPLYKVCEGFAGKVIPDDMKQLAQEVCETMKKIL
GQNFVQVYSEIRKNLKAKRDKRKQEEKLMAVVDPMRNAKRKLRIAAKHRANKKRKITAMK
MGKWMQKKRRTM
NT seq
8139 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccatcgcatgcacaggcggtgaagtcacttaacaaatccccgggccgccgc
cgttttgttttcaggacgttctctcagagggtagaagagattgatatcgatgtcttccgg
aacctcgacaaagtgaaggctgatccctcagaggggtcatcctttttccgggactgcctc
atggaatggagggaattgaatactgcagaggatttcatttcgttttacgaggaaatgttg
cccttggtacaaacattgccgttggttttattgcacaaggagttaatattatcgaaactt
ctctctagattacaaatgaaagcaaggctatctcttgagcctattcttaggttaattgca
gctttatctagagatctcttggtggattttgttctttttctgccaaggattgctgattct
ttagtgtttcttctagaaagtggtgttgacagggagccggagattattgagcagattttt
acatcatggtcatatattatgatgtatttgcaaaagtatttgatacgcgaccttgtgtat
gtgctcaaggttacggtaaaactaagattttatcccaaggattatgtccaagaatttatg
gcagaggcaacatctttcttgcttaggaatgcacaagatgagcagctacaggatggtatt
aaaaagataatgattgaagtcatgaagaaaccattacctgccagaaaatttggcgctagc
actttacttttttatgttttgagaggggcctcatcaaggttccactcaaaagcaaagcga
gtattacggttactgatggacagtacgatacttggttcagactctgttgttgaagttgtg
attactgcatttcgaagactgtgtgaggagatagagccgaaggagttggacttgatctcg
aaatgcttatatcagaaaattaatgactgtgtaacaaatggatgcattttgcatttaagt
cgccttttatcgctgcttatttccattgttcagattcataatgggcgaaagttttatgat
taccaatcgttgcttgaacatgtggggtttcttgtgcaaatatttgtcatgtcttctggc
tttgggaaggcagaggttcccgaaacagaagttattgataaggttcttgaattgatgata
tgtattctcaatgggctccacaattttaataatatgccagctatctctagctgttcattg
caatgggctcctgtattcacgttaaggaactcgagtttgctgacatttattaaagaacta
ctgcagaaggacccttgcatagtatatgttttcgcagttaacatcttaagtgcaatgaag
aatttgataaagacttcgcaagaagaagtcatatatttgttactgtccttctttgacgta
atagaagtgaatgggcaagagcccaacttcttagatggcatgaagagtttgatagagact
tcgcaagaagaagtcatatatttattactgtcctcctttgaagtaatggaagtgaaagtg
caagagcccaacttcctagatggcacatttggaaaagagtttccaaagatgcaggaggct
atcagccgttggattcgggaaataaacgttattgtgcatggtgatccatcatcttctcat
attcctgagactaagttggctcttctgtggggaataattagatgcttgcctcatatgatt
aatttccaagagaggtcatcctgtataatgaatttgatagatgcacttgatcagctaccg
ttgactgaagatggttgcctagcaggtcttcctaaacaagcctggcaaagcgtacttggt
gctgctttgagttcttataataaatcacataatgctgaaaaatctgggcctgaagaaaca
agtaaatttttgcatctagcaaaaagatacagatcatcttcacaagtattgtctgctgtt
gctgattatttggattctgtgtatgggcctacatcggaagcaaacagttgcaatagaaag
tatcatccggaactttcagtggagaatgctgtggatgcattaagcatctttgctgataat
ttgcaccactcaaatagggggatgcgcgtttcaactcttaaaatattgtgtcaccatgaa
cttctaagctgtgtagattctacaaatgatcaatcggttgagaagcaaatgaaaactgaa
gtttctcagacatcccttgtagatagtcatggcaataatgttcttcagttgcttctctca
atcgaggagactccgctttcaatttctaccagccggaaagtgatcctattgatttctaga
atacagatgaatctctctgcgggcagagtacctcaagcctatgcgcccctcgttttgagc
gggatagttggtatattgaataaccgttttagttatctttggaatccagcattggagtgc
cttggagttttgatgagccagcatgctcgacttgtatgggatgactttgttcgttatctt
gagcaatatcagtcaatgtttcatacatcccctgaactagacagagggaactctaaactt
tatgacgagtcaagtgatcttgtccatcgttttcgttcgtttgttactccagaatctgat
agcactccatgtgcaacggtattgtccttgttgctgcaatcattacaaaagattccaaat
gttatagaatctcagtctctggagttaattgatttgttctcaaagtttctgggctataag
ctgaatgatcctgtaagtgcttgtaaaggcaaagagtggaaggttgtccttaaagaatgg
ttaaacttgctgagatcaatgcggaacctgagatctttttatcagagtcaatatcttaaa
gaagttctgcaaaacaggcttctggatgacaatgatgctgaaatccagatgaaggttctt
gattgcctattaatttggaaggatgatttcttactcccatatgatcagcatctgaaaaat
ttaataagctccaaatatttgcgagaggagctaacaacatggagtttgtccaaagaatct
aatcagattgaagaagaacacagagcttatcttgtgcctatagttatccgtcttctgatg
ccaaaagttagaaaattgaagacacttgcctcgcgaaagaatgcaagtgttcatctccga
aaggcagttcttggtttcattgctcaacttgatgttgaggagcttcctcttttcttcgca
ttgttaataaacccattgcaaataagttctaaagaaactgatagtacgtcgtggacttca
tgggaaaattctatggatcaatttcgagcatataatttcttaaagtatttcaccgtggat
aatataatagccctgtcttggaagaagagatatggttttctgcatgtgattgaagatgtt
ctaggagtttttgatgaatttcatctcagaccttttcttgatcttttaatgggatgtgtt
gttcgggtgctgggaagctgcacatcaagcattgacgttgcaaagtgcaatggagtctcc
tcacttgaagatcactctaacgctgatctcactgtacttgagaaagacagtgcatcagca
agtgatgtccggaccagcagtgctgtgaagcagttcaaagctttaaggtctctatgcctg
aaaatcgtttctcttgtcctcaataagtatgaagatcacgaatttggttgcgagttctgg
aacctattctttgcatctgtgaaacatttagtggacggtttcaaacaggagggttccagt
agtgagaaaccaagttcactgttctcttgctttgttgctatgagtagaagccacaagctt
gtatcactcttgagtagggaaaagaatcttgtccctgatatattttccatattgagtgtc
acgtcagcttctaaagctattgtatcatgtgttcttaccttcgttgagaacctgttgaac
cttgatagcgaattaaatgatgaagaagattctacaaagatagtcctacttccaaacctt
gaggcgcttatctgcagcttgcattgtcttttccaaagtgatagtgcagccaagaggaag
ttggtcaaatgtcctggggagagagaaataagaattttcaaattattatctaagtatata
aaggatccgttgctagcaacaaaatttgtagacatcttggtcccattcataacagaaaga
gctaaaaattgtgatctttattcggaagctgtgcaagtcattcgagatattgtcccaatg
ttagggagccatagtactaaaaaaattctgacagcagttaccccgctacttgcttctgtt
gaactggatatgcggctgtctatttgtgatcttcttgattcacttgctgaagccgatcct
tctgtccagtgtctggccaaaattgttcgtaaattgaatgcaacctctactacagaaatg
ggtagccttgattatgacgctatcgtggatggttataatgagatttgtattgatttcttc
tatactgttcctgaggatcatgcattggtcattttatcacattgtgtgtatgatatgtca
tctgaagaattgatctcaaggcatagtgcttatgggtcactgctctcgtttgttgaattt
tctgcccaaatccttggccaagaaggaaaaggtcaccaagaaattacttgtaagatgatt
acgcatgatgatggttgttggactagagcatctattcagcgtgtaacaatcaagtttctt
ttgaagcatatgggggatgcattgagcagagaaactacagtgaagaaggaatggataaat
ttactacgagaaatgcttatgaaactaccagaagtagcaaatcttaattcgttaagggct
ctgtgcagtaacgatgctgaagtagattttttcaacaatattgttcatttgcagaggcat
aggagagcaagggcattgtcgcgttttaggaatgttatcagtacaagcaacatgtcagag
gatattttaaataaagtttttgtgccgctcttttttagtatgttgtttgataaacgagaa
ggaaatggagaacatgttagagttgcgtgcatagaggcccttgcttcagtttctggtcat
gttgaatggaagtcatactatgcgttactggttagatgcctccgagagatgactaggaat
ccagacaagcaaaagcacttattgaggctaacttgctccatattggacaaatttcatttt
tcagaaattcataataaccaaaaagccaatgactctgtggagaatgcttctgatgctagg
acaattggtagttgttcttccactatggtaactgagatacagagatgccttcataaaact
gtgctcccaaagatacataagctactcaattctgattctgataaggtcaatgttaacatc
aatcttgctgcccttaaactactaaagttgctccctggggacataatggactcactgctt
cctagcatcattcatcgtatttgtaacttcttaaagaatcggttggaaagcatacgtgac
gaagctaggtctgctttggctgcttgtttgaaggagcttgggctgcaatacctgcagttt
atagttggggttttgcgagctaccttgaaacgaggatatgagctgcatgtattgggatac
acactcaatttcatcttgtccaagtccatttcaattccaagtagtgggaagttggattac
tgtttggaagatctcctttcagtagtagagaatgacattcttggagatgttgctgaggaa
aaagaagtgggaaagattgcttcaaaaatgaaagaaactaaaatgcgacagtcttttaaa
accctggaattgataggccagagtataacattcaaaactcatgccttgaagcttctttcg
cctgttacaacacatttgcagaagcagctcacgccaaaagtcaaaactgaattggaaaaa
atgttaactcacatagctgttggtattgaacgaaatccatctgtagatcagactgacctg
ttcatctttgtatatggcctcattgaagatgggattaaacacgaaaatggtcagcgcgaa
cattcattagtcgcagaggcaaagaaacatcataggaaggacttgagagagaaaagaata
acttcaggccgacttgtcaacgtatcttcacatcttcttattgtgtttgctctcaggatg
ttgcataaacgtacaacaagtttgaaacagggaaaaattgagcacgttttatcaatgttg
gatccttttgtcacacttctagggagctgcttggcttccaagtacgaagatattttatct
gcgtcccttagttgcctcacttcattggtcaggctgcctttaccatcccttgaatctcaa
gctgataaaatgaaggaggcagtctttgatattgcacatagttcggtaacttcaagcagt
cctctaatgcagtcgtgtctaagattgttggttgtacttctgcggagcaccagtatcacc
ctttcatcagatcagttacatcagttaattcagcttcctctgtttgttgatcttgaaagg
gaaccttctaatcttgccctttcattgctaaaggcaattgttaatcgcaagctagttgtt
cctgagatttatgatcttgtaactcaagttggggaattgatggtgaccagtcaagtggac
tcaattcgcaagaaatgcagtcaaattttattacagtttttacttgattatcagctttca
gtaaaacgtttgcaagaacatctagattttctgctttcaaatttaagatatgagcattca
tctggaagagaagctgtgcttgaaatgcttcatgcaatcattgtcaaatttccaagtaaa
aatgtggatgagcaatcgcagacattatttgtgcatttggtggtttgcttagccaatgat
gaggataatagggttcgttccatgactggtgcagctataaagaagctcattgggtgtgta
agctcacattcacttcattccattcttgagtacacattgtcttggtattcggaagagaca
cagcaactgtggagtgctgctgcacaggtcttgggattactagttgaggtcatgaagaaa
aaatttcaaatacatgttaatagggtactgccagtgaccagaaaaattttacagtctgcc
atcagtaggcaactagatgtttctgaggaaactgctgttgctttctggaaagaggcatat
tattcacttgttatgttggagaagatgctacatcagttccgtgatttgtgctttgaaagt
gatcttgaggaaatctgggaggcaatctgtgagttgcttttgcacccacatatgtggcta
cgccacatatcaagtcgcctcatagccctgtactttgcccgtgtaatagaagctcagaaa
gaaaatgaagaaaaagcatttggaacttattttcttatgaagccaagtagactttttctt
atagctgcttccctctgctgccaattgaagacacaactaactgatgatgctgccagcaac
ctgataacacaaaatattgtgttcgcaatatgtggtgtgcattctttgatgggacagatg
gagtacgtggattctcccaagttctggtctacccttgaacagcatgagcaaggccgtttt
cttaaatctttcgaattgcttgattcaagaaaaggaagaagcatgtttttgtctctttca
tctggtgtatgcaatcaaaaggaacaagctcagtccaaggatattcgatacttgataatt
tcgtatttgcttaaaagaatgggaaaggtttcccttcaaatggaggctattcagatgaaa
attgtattcaatagtttttcaaaaatttcattagaaatcagtcaggacaattgcctccat
tatgcatctcaaatgttgcagccgctatataaagtttgtgaagggtttgctgggaaagtg
atccctgatgatatgaagcaattggcacaagaagtttgtgaaactatgaagaaaatttta
ggtcagaactttgtacaagtttacagcgagatcaggaagaatctcaaggcaaaaagggat
aagaggaaacaagaagaaaagcttatggctgttgtcgatccaatgcgcaatgccaagagg
aagttgagaattgccgctaagcatcgtgccaataagaaaaggaagataacggcgatgaaa
atgggaaaatggatgcaaaagaaacgaaggacaatgtga
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integrated database retrieval system
