Alnus glutinosa (common alder): 133856906
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Entry
133856906 CDS
T10577
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aglu03036
]
133856906
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aglu04812
]
133856906
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133856906
Cytoskeleton proteins [BR:
aglu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
133856906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
Cnd1
Adaptin_N
PDS5
INTS1_R4
Tti2
TPR_TTI1_C
UTP20
MMS19_C
HEAT_Maestro
MMS19_N
V-ATPase_H_N
Sec7-like_HUS
Dopey_N
Npa1
HEAT_DAAF5
IFRD
SEN1_N
Motif
Other DBs
NCBI-GeneID:
133856906
NCBI-ProteinID:
XP_062147936
LinkDB
All DBs
Position
14:complement(22406863..22425819)
Genome browser
AA seq
1428 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHEVLEGSRKSLSAAETTALVDCCLDLLKDNNFRVSQG
ALQALDSAAVLSGDHLKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMQVSSPTIIVE
RAGSYAWTHKSWRVREEFVRTVTSAIGLFASTELPLQRAILPPILQMLNDSNPGVREAAI
LCIEEMYAQAGPQFRDELQRHHLPTSMVKDINARLERIEPQVRSSDGLAGNFAAGEIKPA
SHNPKRSSPKAKSSSREMSLFGAEGDVTEKPIEPIKVYSEKELIREIEKTASILVPEKDW
SIRIAAMQKVEGLVSGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKE
LLGDFEACAETFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVPRVLPRIADSAKNDRS
AILRARCCEYALLILEHWPDAPEIQRSADLYEDFIRCCVADAMSEVRSTARMCYRMFAKT
WPERSRRLFSSFDPVIQRIINEEDGGIHRRHASPSIRDRGVLTSFTSQSSAPSNLPGYGT
SAIVAMDRSSSLQSGTSLSSGLLLSQAKSRSKVSERSLESVLHSSKQKVTAIESMLRGLD
LSEKHNSSMLRSSSLDLGVDPPSSRDPPFPPAVPASNHLTSTLMAESTASSISKGSNRNG
GLVFSDIITQIQASKDSGKLSSQSNVATESLPAFSSYSAKRASEEINDMREARRFMNPNV
DRHYVDTPYRDGNFRESQNSHIPNFQRPLLRKNVAGRMSAGRRKSFDDNQLSLGEMSNYV
DGPASLSDALSEGLSTSSDWSARVAAFNYLRSLLQQGPKGIQEVIQNFEKVMKLFFQHLD
DPHHKVAQAALSTLADIIPSCRKPFESYIERILPHVFSRLIDPKELVRQPCATTLEIVSK
TYSIDSLLPALLRSLDEQRSPKAKLAVIDFAISSFNKHAMNPEGYANSGILKLWLAKLTP
LAHDKNTKLKEAAVTCIISVYSYFDSTAVLNFIISLSVEEQNSLRRALKQYTPRIEVDLM
NFLQNKKERRLKSSYDPSDIVGTSSEEGYIGASKKSNFYGRYSAGSIDSDGGRKWSSTGN
IGQAVSDETRENLYQNFDTGSNADGLSSKTKDMSYTVNSAGQNLWSSQLENVNNDVNVEG
LSTPRLDVNGLMRSDQLGVAEVLAHANEAPTELDLNQYKPKAVNIIAMPDAGPSIPQILH
LISNGNNESPTASKRGALQQLIETSMANDHSIWSKYFNQILTVVLEVLDDSDSSIRELAL
SLIIEMLKNQKDAMEDSVELVIEKLLHVTKAIVPKVSNEAEHCLTIVLSQYDPFRCLSVI
VPLLVTEDEKTLVTCINCLTKLVGRLSQEELMVQLPSFLPALFEAFGNPSADVRKTVVFC
LVDIYIMLGKSFLPYLEGLNSTQLRLVTIYANRISQARTGAAVDADHD
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcattggagctggcgcgcgcgaaggacacgaaggagcggatggcgggcgtc
gagcgcctgcatgaggtgctggagggctctcggaagagcctgagcgcggcggagacgacg
gcgctggtggactgctgcttggatctcctcaaggacaataacttcagggtctcgcagggg
gctctgcaggctttggactccgccgcagtgctctccggcgaccacctcaagctccacttc
aacgcactcgtccccgccgtcgtcgaccgccttggagacgccaagcagcccgtccgcgac
gccgccaggcgcctcctgctcactctcatgcaggtttcttctccaacgatcattgttgaa
agagcggggtcatatgcttggacacataaaagctggagggttagagaagagtttgtacgt
actgtcacatcagcaattggtctttttgcatctaccgagcttcctcttcagcgggctatt
cttcctccgattttgcagatgcttaatgattcaaatcctggtgttagagaagcggctata
ttgtgtattgaggagatgtatgcacaggctgggcctcaatttcgtgacgaacttcagcgc
catcatcttcctacgtccatggtgaaagatatcaacgccaggctagagaggatagaacca
caagttcgctcttcagatggacttgcaggtaatttcgctgctggagagattaaacccgcg
agccataatcccaagagaagtagtccaaaggccaagagttcatctagggagatgtctctt
tttggagcagaaggagatgttacagaaaaacccatagaacctattaaagtatactcagag
aaggagctaatacgggaaattgaaaagacggcttctatccttgtaccagaaaaagactgg
tccatcaggattgctgcaatgcagaaagttgaaggccttgtttctggaggtgctgctgac
tatccatgtttccggggactcttgaagcaacttgttggccctctaagcacacaattatcc
gatcggaggtctagcatagtgaagcaggcgtgccatctattatgctttttgtcgaaggag
ctgttgggagattttgaggcatgtgcggagacgttcattccagtgcttttcaagctggtt
gtgatcactgtacttgtaattgcagaatctgcggataactgcataaaaacgatgttgcgt
aactgcaaagttccccgtgtgctccctcgtatagccgattctgcaaaaaatgaccgtagt
gcaatactccgtgcaaggtgttgtgaatatgcactattgatattggaacattggcccgat
gcgcctgaaatacagcgatcggcagatctttatgaagattttataagatgttgtgttgca
gatgcaatgagtgaggtgcgatcaactgcaagaatgtgttatagaatgtttgcaaaaact
tggccagagcgttcccggcgcttattttcatcctttgatcctgttattcaaaggataata
aatgaagaggatggaggcatacataggcgacatgcttctccttccatccgtgatagaggt
gtactgacttcatttacctctcaatcatctgctccctcaaatctacctggatatggaaca
tctgctattgttgcgatggacagaagttcaagtttacagtcagggacatcactgtcttct
ggactacttctgtcacaagcaaagtcacgtagtaaagtttctgaacgtagtcttgaaagt
gtgttgcattctagcaaacagaaggtcactgcaattgaaagcatgctcagaggtttggat
ttatcagagaaacataattcttcaatgctccgatcatctagtttggatctaggagttgac
cctccatcatctcgtgatccaccgttccctcctgctgtcccagcttctaatcatctgaca
agcactttaatggcagaatcaactgcctctagtatcagtaaaggtagtaaccgaaatggc
ggcttagttttttctgacatcatcacccagattcaagcttccaaagattctggtaaattg
tcgtctcaaagtaatgtggcaactgagtctttgccagcattttcatcatactcagctaag
agggcttctgaagagattaatgatatgagggaggctaggcgatttatgaaccccaatgtt
gacaggcattatgtggatacgccttacagagatggaaactttagggaatcacaaaacagt
cacattcccaattttcagaggccgcttttaagaaagaatgttgctggacggatgtctgca
ggcaggagaaagagttttgatgacaaccagctgtcacttggggagatgtcaaattatgtg
gatggtccagcatcacttagtgatgctctgagtgagggactcagtacaagttctgactgg
tctgctagggttgcagctttcaattatcttcgttctttgctgcagcagggcccaaaaggt
attcaagaggtaatccagaattttgagaaggtcatgaagttgtttttccagcacttggat
gatccccaccataaagttgcacaagctgctctctcaacacttgcagatattattccatct
tgccgaaagccgtttgagagttacatagaaaggatattaccccatgttttctcacggtta
attgatccaaaggagttagttaggcaaccgtgtgctacaaccttggaaattgtaagcaaa
acttacagtattgattctctcttacctgctttgctccgctcactggatgaacagcgatca
ccgaaggccaagttagccgttatcgattttgctatcagttcctttaacaagcatgcaatg
aatcctgaaggctatgccaacagtggtattcttaagttatggcttgctaaattgactcct
ttggcccacgataaaaatactaaacttaaggaagcagctgttacgtgcattatatccgtt
tactcctactttgattcaacagccgtcctgaattttattattagtttatcagttgaggaa
caaaattccttgagacgagcccttaaacaatatactcctcgcattgaagtggacttaatg
aactttttgcagaacaagaaagaacgacgactgaagtcttcatatgatccatctgatatt
gttggaacatcttctgaagaaggatatattggtgcatcaaagaagagtaatttctatgga
aggtattctgctggttccattgatagtgatggtgggaggaagtggagttctactggaaat
attggccaagcagtttctgatgaaactcgggagaacttgtatcagaactttgatactggt
tctaatgctgatggcctttcttccaaaaccaaggatatgtcttacacggtcaattctgca
ggtcagaacttatggtctagccagctagaaaatgttaacaatgatgtaaatgtggaaggt
ctgtcaactcctcgtctggacgttaatggtctgatgaggtcagaccagttgggggttgca
gaagtcttggcccatgctaatgaagctccgactgagttggaccttaatcaatataaacca
aaagctgtaaatattattgccatgccagatgcaggaccaagcattcctcaaattcttcat
ctgataagcaacgggaacaatgagagccctactgcaagtaagcgtggtgcacttcagcag
ttaattgaaacttccatggctaatgatcactctatttggtctaagtacttcaatcaaatc
ctgacagttgtacttgaggtgttggacgattctgattcctcaattcgggaacttgctctt
tcattgattattgaaatgcttaagaaccagaaagatgcgatggaagattctgttgagtta
gtgattgagaagctgcttcatgttactaaggctattgttcccaaagtttcaaatgaagca
gagcactgcttgactattgttttgtctcagtatgatcctttcagatgtctaagtgttatt
gttcctttattggttactgaagatgagaaaactcttgttacttgcataaactgtttgacc
aagcttgtgggtcggctctctcaggaggaactgatggttcagttaccctcctttttgcct
gctctttttgaagcatttggaaatccgagtgcagatgttcgtaagactgttgttttctgt
cttgtggatatttatatcatgcttggaaaatcattcttgccgtacttggaggggctcaac
agcacacaactgcggttggtcacgatatatgctaatcgaatctcacaggctaggacaggc
gctgcagtagatgctgaccatgattag
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