KEGG   Alnus glutinosa (common alder): 133856909
Entry
133856909         CDS       T10577                                 
Name
(RefSeq) uncharacterized protein LOC133856909
  KO
K12828  splicing factor 3B subunit 1
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133856909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aglu03041]
    133856909
   03036 Chromosome and associated proteins [BR:aglu03036]
    133856909
Spliceosome [BR:aglu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    133856909
 Complex B
    133856909
 Complex C
   U2 SnRNP specific factors
    133856909
Chromosome and associated proteins [BR:aglu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    133856909
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 Htt_N-HEAT_1 HEAT_EF3_N HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-GeneID: 133856909
NCBI-ProteinID: XP_062147939
LinkDB
Position
14:23919103..23923233
AA seq 1268 aa
MDPEIAKTQEERRRMEQQLASLTSVTFDTDLYGGNDRDAYVTSIPVNEDEESLDAMDNEV
ARKLASYTAPKSLLKEMPRGGADDDHEDLLGFKKPQRIIDREDDYRKRRLNRVISPERHD
AFAAGEKTPDPSVRTYADIMREEALKKEKEETLKRIAKKKEEEAAAKETKAAEDKAPKRR
NRWDQSQDHGGDAAAKKAKTTSDWDLPEDTTPGRWDATPTPGRLGDATPSASAGRRNRWD
ETPTPGRLADATPAGGATPGATPAGMTWDATPKLSGLATPTPKRQRSRWDETPATMDSAT
PMEGATPTAAAASFTPGITPVGGVDLATPTPGAINLRGSITPEQYNLLRWEKDIEDRNRP
LTDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPMGTPLYSIPEENRGQQFDVP
KEVPGGLPFMKPEDYQYFGALLNEEDEEELSAEAQKERKIMKLLLKVKNGTPPQRKTALR
QLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVV
IEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVAS
ALGIPALLPFLKAVCESKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLLDE
NQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFVIPLM
DALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDVLPEFFRN
FWVRRMALDRRNYRQLVETTVEMANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVV
NLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTI
KWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGA
LKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWM
RICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAI
AIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDA
LMDRDLVHRQTAASAVKHMALGVAGLGCEDALIHLLNYVWPNIFETSPHVINAVMEAIEG
MRVALGAAIVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPLLEDEHNNVYS
RPELTMFV
NT seq 3807 nt   +upstreamnt  +downstreamnt
atggacccggagatcgccaagacccaggaagagcggaggcgcatggagcagcaactggcg
tctttgacctccgtcaccttcgacactgacctatacggcggcaacgaccgcgacgcctac
gtcacgtccatacccgtcaatgaggacgaagagagccttgacgccatggacaacgaggtc
gcccgcaagctcgcctcctacaccgctcccaagtctctcctcaaggaaatgcctcgggga
ggagccgacgacgaccacgaggatcttctggggttcaagaagccccagcgcatcatcgac
cgcgaggacgactaccgcaagaggaggctcaaccgcgtgatctctcccgagaggcacgac
gccttcgccgccggggagaagacgccggacccatcggtaagaacctacgccgacatcatg
agggaggaggcgctcaagaaggagaaggaggagactctcaagaggatcgccaagaagaag
gaggaagaggccgccgctaaggagaccaaggctgctgaagataaggctcccaagagaagg
aatcgctgggaccagtcccaggaccatgggggggacgctgcggccaagaaggccaagaca
acgtcggattgggacttgccggaggatacgacccctgggcggtgggatgcgactccgact
cctggaagattgggcgatgcaacaccatctgcgtctgcaggaaggaggaatcgctgggac
gagacaccaacgcctgggagattggccgatgccaccccggccggtggggctactccggga
gctaccccggcggggatgacttgggatgccacgccaaagctttcaggcctcgccacgccc
actccgaaacggcagaggtcgaggtgggatgagacgcccgccacgatggacagcgcgacc
ccaatggagggtgcaacgcctacggctgcagcggcgtcgttcacgcctgggattactccc
gtgggcggagtagatctggcgaccccgacgccgggggcaatcaatctgcgtggctccatc
accccggagcagtacaatttgctgaggtgggagaaggatatcgaggacaggaaccggcct
ttgaccgatgaggagctggatgccatgtttccacaagagggttataagattttggagcct
ccggcatcgtatgtgcctattaggactccggcgaggaagctgctcgcgacgcccactcca
atgggtacgccactgtactcaattcccgaagagaatcgcggccaacagtttgacgtgccc
aaggaagtgcctggtggtttgccgttcatgaagcccgaggactaccagtactttggtgcg
ttgttgaatgaggaggatgaagaggagttgtctgctgaagcgcagaaagagcggaagatc
atgaagctcttgcttaaggtcaagaatggaacgccgccgcagaggaaaacggcgctgcgg
cagcttacggataaggcgagagagtttggggctggccccttgtttaaccggattctgccc
ttgcttatgcaacccactttggaggaccaagagaggcatctattggtgaaggtaattgat
agggtgctttataagttggatgagttggtacgcccgtatgtgcataagattctagtggtg
attgagcccttgttgattgatgaggattactatgcgcgtgttgaagggcgagagattatt
tccaatcttagtaaagctgctggcttggccaccatgattgctgctatgagaccggatatc
gataacattgatgaatatgtcaggaacacgactgccagagctttcagtgttgttgcttct
gctcttgggattcctgctctcttgcccttcttgaaggccgtgtgtgagagtaagaaatca
tggcaagctcggcacactggaattaagattgttcagcagattgctatcttgatcggttgt
gctgtgcttcctcatctcaggtctcttgtggagatcatagaacatggtctgctggatgag
aatcagaaggtgaggacaatcaccgcattgtctctggctgctcttgctgaggctgctgcc
ccctatggaattgagagctttgactcggtgttgaaacctttgtggaagggtatcaggtca
caccgtgggaaagttttggctgcgttcttgaaggctatcggctttgtcatcccacttatg
gatgcactatatgctagttactatactaaggaagttatggttattttgattcgtgagttt
cagtcacccgatgaggaaatgaagaagatagttctgaaggtcgtgaagcagtgtgtgagt
acggagggtgtggaggctgattacattcgcaatgatgttcttcctgagttctttagaaac
ttctgggtcaggaggatggctttggacaggagaaactataggcaacttgtggagacaacg
gtggagatggcaaacaaagttggtgttgctgatatagtagggagaattgttgaggatctt
aaagatgagagtgagccttacaggcgaatggttatggaaaccattgagaaggtagttgtc
aacttgggtgcatctgatattgatgctcggttggaggagcttctaattgatggaatcctt
tatgccttccaagagcagaccagcgatgatgccaatgtgatgcttaatgggtttggtgcg
gttgtgaattcacttgggcagagagtgaaaccgtacctaccccagatttgtggtaccatt
aaatggcgattgaataacaagagcgcaaaggtgagacagcaagcagctgatctcatatca
aggattgctgttgtcatgaagcagtgccaagaggaacaactgatgggtcaccttggtgtt
gtcttgtatgagtatctgggagaagagtatccggaggttctgggatcgatcctgggagct
cttaaggcaattgtcaatgttattggtatgacaaagatgactcctcctataaaggatttg
cttcctaggttgacaccaattctgaagaataggcatgagaaagtccaggagaactgcatt
gaccttgttggacgaattgccgaccgtggggctgagtttgttccggcaagggaatggatg
aggatttgcttcgagcttcttgagatgcttaaagcccacaagaagggtattcggcgagct
acggtgaacacttttgggtatattgccaaagccattggaccacaagatgtcctggctacc
ttgttgaataatctcaaggtacaggagcggcagaaccgtgtctgcacaactgtggccatt
gctatagttgcagaaacctgttctccctttacagttctgccagcgttgatgaatgagtat
cgtgtgccagagcttaacgtgcagaatggtgtcttgaaatccctctcttttcttttcgag
tatattggtgaaatgggaaaagactacatttatgctgtgaccccgttgcttgaggatgcc
ctcatggatagggatttggttcacaggcagactgcggcttctgctgtaaagcacatggcc
ttgggggttgctggtttgggttgtgaggatgctttaatccacttgctcaactatgtgtgg
cccaacatttttgagacttccccgcatgtgataaatgctgtcatggaagcaattgaagga
atgagggtggccttaggtgctgctattgtgctaaactactgccttcaggggctcttccat
cctgctcgtaaggttagggaggtctactggaagatttataactcactgtatattggagca
caagatgctcttgtggcggcttatcctctgctggaagacgagcataacaacgtatacagt
aggcctgagttaacgatgtttgtctga

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