Alnus glutinosa (common alder): 133856977
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Entry
133856977 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133856977
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
aglu03015
mRNA surveillance pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133856977
09122 Translation
03013 Nucleocytoplasmic transport
133856977
03015 mRNA surveillance pathway
133856977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133856977
03041 Spliceosome [BR:
aglu03041
]
133856977
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133856977
Spliceosome [BR:
aglu03041
]
Complex C
Other components
EJC/TREX
133856977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
133856977
NCBI-ProteinID:
XP_062148033
LinkDB
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Position
14:complement(19504647..19510621)
Genome browser
AA seq
717 aa
AA seq
DB search
MSSPYPILGNRPIDQWKVTELKEELKRRKLTTKGLKDDLIRRLDESLRVEMENAREEADN
GVDCGSEPVLGEKDAQTVKVATGIAKELADPGGNKNKKTDSVMVQVDINDSAAALDQGKV
EEGNILGVTDAARVEEELVVDDTAVETSIKVTETVTSEVVLSEHNLENIKTQKDNGNSKS
STENEDLKPQLENEDLKPQLENEDSMPQLENEDLKPQLENEYSKPQLENEGLKPPPEGVM
HSSTPENQVSEVSPILGSQVKSDSISTDSVSINEKIELKDNVIADHVKLELDVVNLEMVE
PSSSNVVPVGGESHPMDVEVPHENKESDGGKDDNRATDADISKKIDSADLGYSEQLNLDR
SSGDDSMEEDVLESKQIDSKYNFEEVENRSEKSEVAVVKEESHVAILGDAISAEKKDVDV
ESENRPAALVEKRKLNDQAAVGNNEPIKRQRRWNSEGLKVPEPQSSTTPTTTPKETFPTT
PKDTFQSTALKRNFSRSDSTNSESTPKERVVPPSQKPPTNSLRIDRFLRPFTLKAVQELL
GKTGSVTSFWMDHIKTHCYVTYTSVEEATETRNAVYNLQWPPNGGRLLLAEFVDPQEVKM
RVEEAPQTPTTPASAGPIVPPAPPTSQPQPSPRQHRQQLPPPPPLPPPPPLSNPPQTRER
VHLPPPPPLPEKLDPPIVTLDDLFRKTKATPRIYYLPLSEEQVAAKLAAQGKNTKQQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaccatatccaattcttggcaatcgaccaattgatcagtggaaggttacagag
ctaaaagaggaacttaagagaaggaaattaacaaccaagggtttgaaggacgacttgatt
agacgtttggatgaatctcttcgtgttgaaatggaaaatgctagagaagaagcggataat
ggtgttgattgtggaagtgaacctgtacttggagaaaaagatgctcagacagtgaaagtt
gctacaggaatagctaaagaacttgcagatcctggtggcaacaagaacaagaagacagat
agtgttatggttcaggttgacattaatgacagtgcggcagccttggatcaaggaaaagtt
gaggaaggtaacatacttggtgttactgatgctgctagggtggaagaggagctggttgtt
gatgatactgctgttgaaaccagcattaaagtaactgagacagtgacatctgaagtagtg
ttgagtgagcacaatttggagaatattaaaactcaaaaggataatggaaactcaaagtcc
tcgactgagaatgaggatttgaagccccagctggagaatgaggatttgaagccccagctg
gagaatgaggattcaatgccccagctggagaatgaggatctaaagccccagctggagaat
gagtattcaaagccccagctggagaatgagggtttaaagcctccgcccgaaggtgtcatg
cactcttcaactccggagaaccaggtatctgaggtcagccctattttagggtctcaagta
aaatctgattctatttctactgattctgtgtcaattaatgaaaaaattgaactaaaggat
aatgtaattgctgatcatgtcaaattagaactagatgttgttaaccttgagatggtggaa
ccatcatccagcaatgttgtcccagttggtggcgaatcacatccaatggatgttgaagtg
ccacatgagaacaaggaatctgatggagggaaagatgacaatagagctacagatgcagac
ataagcaagaaaattgatagtgcagatttagggtactcagaacagttaaatttagacagg
agttctggtgatgattccatggaagaggatgtgctggagagtaagcaaattgattcgaag
tataattttgaagaagttgaaaatagaagtgagaaaagtgaagtggctgttgtgaaggag
gaaagtcatgttgctattcttggggatgctatatctgctgaaaaaaaagatgtcgatgtt
gagagtgagaatcgaccagctgcacttgttgagaaaagaaaacttaacgatcaagcggca
gttggaaataatgagccaatcaagaggcagcgcaggtggaactctgaaggactcaaagtt
ccagagccccagagctctactactcctaccactaccccaaaggagactttcccgactacg
cccaaggacactttccaatctactgctttgaagcgtaatttctctagatcggactctaca
aatagtgagagtacacccaaggaacgtgttgttccaccatcgcaaaaacctccgactaat
tcccttagaattgatcgatttctgcgtccctttaccttgaaagcagtgcaagaacttctg
ggaaaaaccgggagtgttacaagtttctggatggaccacatcaagacccactgctatgtt
acttacacatcagttgaagaagccacagaaacgaggaatgctgtgtataacttacagtgg
cctccgaatggtgggcgtctcctactggctgagtttgttgatcctcaggaagttaaaatg
cgggtggaggaggctcctcagactccgactacgcctgccagtgctggtcctattgttcct
ccagcaccacccacctcgcagccccagccctcaccccgtcaacataggcagcagcttcca
cccccacctcctcttccaccaccgccacctttgtctaacccccctcagacaagagagcgg
gttcatcttccacccccacctccgcttccagagaaacttgaccctcctattgtaactttg
gacgatctgtttcggaaaaccaaagctacccctcggatatactatttgcctttgtcagaa
gaacaagtagcagcaaaacttgcagcgcagggaaaaaacaccaagcagcagtag
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