Alnus glutinosa (common alder): 133857241
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Entry
133857241 CDS
T10577
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03440
Homologous recombination
aglu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133857241
03460 Fanconi anemia pathway
133857241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aglu03032
]
133857241
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133857241
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
133857241
DNA replication proteins [BR:
aglu03032
]
Eukaryotic type
DNA Topoisomerases
133857241
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
133857241
FA (Fanconi anemia) pathway
133857241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
133857241
NCBI-ProteinID:
XP_062148416
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Position
14:13622441..13713921
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AA seq
920 aa
AA seq
DB search
MAGGRTINVLNVAEKPSVAKSVASILSRNQGLRTRDGRSRYNRIFEFNYSINGQPCHMLV
TSVTGHLMELEFEDRFRKWHSCDPADLYHLPVRKFVPEDKLDIKRTLEEEARRCQWLVLW
LDCDREGENIAFEVVEVCTAVNAHLTIRRAHFSALIDSEIHEAVQHLVEPNKWFSDAVDA
RQEIDLRIGASFTRFQTMLLRDAFVIDLATDDRNLVLSYGPCQFPTLGFIVERYWEIQAH
EPEEFWTINCSHKSDEGIATFSWMRGHLFDYTCAIIIYEMCVQEPIATVSKVRQQEKLKY
PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSQRTDLHAIVQE
QQRHPVWGSYAQRLLDTGAGLWRNPSNGGRDDKAHPPIHPTKLFSGETRLSQDHHRLYEL
VVRHFLACVSQPAVGAETNVEIDIAGELFSASGRVILAKNYLDVYRFESWGSSTIPPYVF
GQQFMPTSLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDSN
TRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGTKRKAEVLATSLQQMKAC
FLDARLNKAKLFGAMAVFFERSNQSGGDEQHAHGGVVRRCGHCQESDMVLRQNRDGNFMV
GCLGYPQCRNAIWLPGSISEAVVTTNICNTCTPGPVYLIQFKFRQLEIPPNYNANHLGCI
GGCDEILRQLIEICGTGSRIPARGRGSTASSINVQQSNSRLGEARHSTCIYCQQTGHSSS
DCPSQVSGSRSGRYRGMNPQSGESSVPCSTCGTPCILRTANTENNSGRKFYSCQSQNCNF
FVWEDNLNNGTGGRSVKSARMNVSASNTSRSRVRGRGGRGGAHAATGTFVSATGDPVSGR
RCFVCGDPSHFANVCPNRGS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgggcgcaccatcaacgtcctgaacgtggcggagaagccgtcggtggccaag
tcggtggccagcattctctccaggaatcagggcctgagaacccgggacggccgctcgcgc
tacaacaggattttcgagttcaattactcgattaacggacagccctgccacatgctcgtc
acctctgtcactggccacctcatggagctcgagttcgaagaccgcttccgcaagtggcac
tcctgcgaccccgccgatctctaccaccttcccgtccgtaaattcgtccccgaggacaag
ttggatatcaagaggacgttggaagaggaagctaggaggtgccagtggcttgtactgtgg
ctagattgtgacagagaaggagaaaacattgcatttgaagtggtagaggtttgcacagca
gtaaatgctcatcttaccattaggagggctcacttctctgccttaattgacagtgaaatc
catgaagcagtgcaacatcttgttgagccgaataaatggttttctgatgcagtggatgct
aggcaagaaatagatcttcggattggtgcttctttcacaaggtttcagactatgctattg
agagatgcatttgttattgatttggctacagatgacagaaatcttgttctaagttatggt
ccttgtcagttccccacacttggctttattgtggaaagatattgggaaatacaagcacat
gagccggaagagttttggacaatcaactgctcacacaaatcggatgaaggcattgctact
ttcagttggatgcgtgggcatctgtttgactacacttgtgccattataatttatgagatg
tgtgttcaggagccaattgcaactgtttcaaaggttagacaacaggagaagctgaagtat
cctccacatcctttgaataccattgagcttgaaaaacgtgcttcaagatacttccggatg
agttctgaacacactatgaaggttgctgaagatttataccaagctggtttcattagttat
cctcgtacagagactgactgcttttcacagagaactgatttgcatgcaattgtgcaagaa
caacaaaggcaccctgtatggggatcatatgcacagcggttgttggacactggggcagga
ctttggagaaaccctagtaatggtggacgtgatgacaaggcccatccacccattcatcca
acaaaacttttttctggagaaactcgattgagtcaagaccaccatagattgtatgagctg
gttgttcgccatttcctggcatgtgtctcccagccggcagttggggcggaaactaatgtt
gaaattgatattgctggtgaattgttttctgcatcagggagagtgatactagccaaaaac
tacttagatgtttatcgctttgagtcttggggaagttcaacgatcccaccatatgtcttt
ggacaacagtttatgccaacatcgttgactctagattcaggagttactagaccaccacca
cttctgagtgaagctgatttgctaagttgtatggacaaggagggcattggtacagatgca
acgatgcatgatcacataaaaaaactgcttgatcggttttatgcaacgaaggactcaaac
actcgcttctcgccaactaatctaggtgaggcactggttatgggatatgatgacatgggg
tataagctttggaaaccttatcttagagcagttatggagcgtgacatgaaagcagttagc
gaaggcaccaaaagaaaagctgaagttttggcaactagcttgcagcagatgaaagcttgc
ttcttagatgctaggttgaacaaagcaaaactttttggagccatggcagttttctttgag
aggtccaatcaatctggtggagacgagcagcatgcacatggaggtgttgttaggcgatgc
ggacattgccaggaatcagatatggtgcttcggcaaaaccgggatggaaatttcatggtc
ggatgcttgggttatccacagtgcaggaatgctatctggctccctggatctatatcagag
gcggtggtaaccactaatatttgcaacacttgcactccaggtcctgtttacttgatccaa
ttcaagttccgccaactggaaataccaccaaactacaatgccaaccatttaggttgcatt
ggtggctgtgatgagattcttagacagctgatagaaatctgtggaactggttctcgtata
ccagcaagaggacgaggatccactgcatcatccatcaatgtgcaacaaagtaactctagg
ctgggtgaggctaggcacagtacttgcatatactgccagcaaacagggcattcttcaagt
gattgtccatcgcaggtttcaggttctcgtagtggtcggtatcgtggaatgaacccacaa
agtggagaatcttcagttccatgtagcacatgtggaacaccatgcatcttgcgaacagct
aatacagaaaacaatagtggaagaaagttctactcatgtcagtcacaaaattgcaacttc
tttgtatgggaggataacctaaacaatggcactggaggaaggagtgttaaaagtgcaaga
atgaatgtctcagcatctaataccagcaggagtcgtgtccgtggcagaggtggccggggt
ggggcacatgctgctaccggaacatttgtgtcagcaactggtgatcctgtttctggcaga
agatgttttgtttgtggtgatccatcacattttgcaaatgtttgcccaaatcgtggttct
tga
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