Alnus glutinosa (common alder): 133857445
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Entry
133857445 CDS
T10577
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aglu Alnus glutinosa (common alder)
Brite
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133857445
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133857445
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133857445
microRNA pathway
RISC loading complex
133857445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133857445
NCBI-ProteinID:
XP_062148702
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Position
14:5886096..5897299
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AA seq
958 aa
AA seq
DB search
MPGHRGQECTGFSESLCRTEVAHMHMKDPLENPVISREPLQSSMNQKTSSQMVLKKDDCL
EDIKNIISRRKGRRRCRGPKVEKLQEAKLDHAGVGSPAPFKSLMLHRRPGYGQLGTKCLV
KANHFLAEIPGSDICQYSVKINPEFTYHKLNKAIMTQLVKIHRETDLGMRLPVYDGGRNL
YTAGLLPFTTKEFIIVLCNDEEGTRNTREREFKVTITFVALASMHQLRELLAGKPVDTPQ
VALTIIDIVLRQLAAQRYVSVGRFLYSPDIKKPQNLGGGLESWRGFYQSIRPTQMGLSLN
IDMSSTAFIEALPVIDFVAQILDKDVFSRPLSDADRVKVKKALRGVKVEVTHRENVRRKY
RISGLTSQPTRELIFPVDEQKNMKSVVEYFQEVYGYTIQYSHLPCLQVGNQKKVNYLPME
ACKIVGGQRYTKGLNEKQITSLLKVSCQRPCEQEMDILQTVHQNDYEQDPYAKEFGISID
NKLASVEARVLPAPWLKYHDTGKETEFLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQ
ESTAHGFCQELVHMCQISGMEFNRNPIIPIYSARPDQVKKALKYVYYAATSKLEGKELEL
LIAILPDNNGSLYGDLKRICETELGLISQCCLTKYVFKSSRQYLANVSLKINVKMGGRNT
VLLDAISSRIPLVSDIPTIIFGADVTHPETGEDSCPSIAAVVASQDWPEVTKYAGLVCAQ
PHREELIQDLFKTWKDPQRGTVTGGMIRELLLSFQKATGQKPLRIIFYRDGVSEGQFYQV
LLYELDAIRKACASLETSYQPPVTFIVVQKRHHTRLLPNNHNDRSCIDKSGNILPGTVVD
SKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEIQSLTNNLCYTYARCTRSV
SVVPPAYYAHLAAYRARFYMEPDLHENAKIRSARTSNGSCVRPLPALKEKVKSVMFYC
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggcaccggggacaggagtgtacagggttctctgaatctctttgtcggacagag
gtggcccacatgcatatgaaagaccctctggagaaccctgtgataagtagggaacctcta
cagagctccatgaatcagaagacatcatcccagatggtgctcaaaaaagacgattgcttg
gaagatataaagaatattatatcgaggagaaagggaaggagaagatgtagaggacccaaa
gtagagaaattgcaagaagcaaagcttgatcatgccggagtggggtccccagctccattc
aaaagcctcatgttacaccgcaggcctggctatgggcagctggggaccaagtgtttggtt
aaagccaatcacttccttgcagagataccagggtcagatatatgtcaatatagtgtgaaa
ataaaccctgaatttacttatcataaattgaacaaagctatcatgacccagttggtgaaa
attcatagagaaactgacttaggaatgaggctccctgtttatgatggtggaagaaacctt
tacacagctgggttgctgccttttaccacaaaagaattcatcatagtattgtgtaatgat
gaagaggggacacgcaatacaagggaacgagaatttaaagtgacaatcacttttgtagct
ctagctagtatgcaccaattacgtgagcttcttgcagggaaaccagttgatacccctcaa
gtcgcacttacaattattgatatcgttttaaggcaactagcagcccaaaggtacgtatca
gttggcagatttctctattctcctgatattaagaaaccacagaatctgggtggtggctta
gaatcatggcgaggcttctaccagagtataagacctactcaaatgggactctccctgaat
atcgacatgtcatcaactgcgttcattgaagcactccctgtcattgattttgttgctcaa
attttggataaagatgtgttttctaggccattatcagatgcagatcgtgtaaaggttaag
aaagcgcttagaggggtcaaagttgaagttacacacagagaaaacgttcgaaggaaatac
cgaatttcagggttgacatcacagcctacaagggagctcattttcccagtagatgagcaa
aagaacatgaaatccgttgttgagtactttcaagaagtgtatggatataccattcaatat
tcccatctaccttgtcttcaagtgggaaaccaaaagaaggtgaactatttaccaatggag
gcttgcaagatagttggcggacagagatacacgaaagggctgaatgagaagcagataact
tctctgctgaaagtttcatgccaaagaccctgtgaacaagaaatggacattttacagaca
gttcatcaaaatgactatgagcaggatccctatgccaaggagtttggtatcagtatagac
aacaagcttgcatctgttgaggctcgggtccttccagccccatggctaaagtatcatgat
actggaaaggaaacagaatttttgcctcaagttggacagtggaatatgatgaacaagaaa
gtaataaatggaagcacagtcagatattgggcttgtatcaacttctcacgcagtgtccaa
gaaagcactgctcatggtttttgtcaagagttggttcacatgtgtcaaatctctggcatg
gaatttaaccgcaaccctataattccaatatattcagccagaccagatcaagtaaagaag
gccttgaaatatgtgtactatgctgctacaagtaagcttgaaggaaaagagttggagttg
cttattgccattcttccagacaacaatggctctttgtatggcgatctgaaacgaatttgc
gaaacagagctggggttgatttctcaatgctgccttacaaaatatgtcttcaagtctagc
agacagtatctggcaaatgtgtccctcaaaatcaatgttaagatgggaggaagaaataca
gtgcttttggatgctataagttcaaggatacctttggttagtgacattccaacgataatt
tttggagctgatgttactcatccagaaactggagaggactcttgtccatctatagctgct
gttgtagcctctcaagattggccagaagttacaaagtatgcagggttggtatgtgcacag
cctcatcgagaagaacttatccaagatttgttcaaaacctggaaagatcctcaacggggt
acggttactggaggcatgatcagggaacttttactgtcttttcaaaaggctactggacaa
aaaccattgaggataatattttacagggatggagtcagtgaaggacagttctaccaagtc
ttactatatgaacttgatgccattcgtaaggcttgtgcctcattggaaacaagttaccaa
cctccggtaacatttattgtggttcaaaagaggcatcacactagactactcccaaacaat
cacaatgacagaagttgcatcgacaagagtggaaatatcttgccaggtactgtggtggat
tcaaagatctgtcatccaaccgagttcgacttttatttgtgtagtcatgcaggaattcag
ggcacgagtcgacctgctcattatcacgtgctctgggatgagaacaattttagtgccgat
gaaatccaatctctgacaaacaacctgtgttatacgtatgctcgatgcactcgatctgtt
tctgtagtgccacctgcatattatgctcatctggcagcctacagagctcgattctacatg
gagccggatctgcatgagaatgctaaaatacgttccgcacggacttcaaatgggtcgtgt
gttcgccccttgccagcgttgaaagagaaggtgaagagcgtcatgttttactgctaa
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