Alnus glutinosa (common alder): 133857738
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Entry
133857738 CDS
T10577
Name
(RefSeq) crossover junction endonuclease EME1B-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03440
Homologous recombination
aglu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133857738
03460 Fanconi anemia pathway
133857738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133857738
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133857738
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
APG6_N
Motif
Other DBs
NCBI-GeneID:
133857738
NCBI-ProteinID:
XP_062149052
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Position
14:17732362..17744716
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AA seq
566 aa
AA seq
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MPQPILLSDDEEENGLSTPVHISSKKQRRFEPDNPAALVLLDDPTPKKPGPTSTPSFVPE
TPMSASSSVAIVKCTTGSSHPQIRVSDSQNKFSGICGLICLESDNESESGPGREKWKENE
TMGTDFDASRDSDWSSRINESTSSLGNDNIMRMFGDSSLHSNSLRDDVHQVYDHLDKDNV
SMEQINDNVNQKRRTKVDAEKKSMMDRAMGRKKMTQEERIHLMEEKKLKKEQEKLQKAAQ
KAEAAEMKKLQKEKQKWEKGKFALKSIVAEIDAKVIELGSVGGHLLTRFAEKGLTYRITS
NPIERSIVWTMTVPEHISQISSNGMEIPYILFVYEAEEFCNLVINESLLDHVSSVRSRYP
SYTICCLTSRLMSYINKREQEKYKNPSNNNGWSRPPVEEVMAKLTTHFSKVHSRQCMDEA
ELAEHVVGLTSSLASCQYRKKLTRLSVNANGSVIPKDAVDRNLIKKNLWLKALISIPKVQ
PRFATAIWKKYPTMKSLLSVYMDPSKSVHEKEFLLKDLTTEGLLGEDRRLGEVCSKRVYR
ILMAQSGSIKTDDVENGADFFIGQSS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgccccagccaatcctcctctccgacgacgaagaagaaaatgggctctcaaccccagtc
catatctcttccaagaaacaacgccgattcgaaccggacaaccctgcggctctggtcctt
ctcgacgacccgaccccgaagaaaccgggccccacctccacgccctccttcgttcccgag
acccctatgtccgcctcaagttcggtcgcaatcgtcaaatgcacaacgggctcatcgcat
ccccaaattagggtttcagattctcagaacaagttctccggaatttgcggattgatatgc
ttggagtctgacaatgagtctgaaagtggtcctggaagggaaaagtggaaggagaatgaa
acgatgggcaccgattttgacgcgtcgagggactcggattggagttctagaattaacgag
tccacgagttctctcgggaatgataatataatgcgaatgttcggggacagctctttgcat
tcgaactcattgcgagatgatgttcatcaggtatatgatcatcttgacaaagataatgtt
agtatggagcagatcaatgacaatgtaaatcagaaaaggagaactaaagttgatgctgag
aagaaaagtatgatggacagagctatgggaaggaagaagatgacgcaagaggaaaggatt
cacttaatggaagagaagaaactaaagaaggaacaagagaagttgcaaaaagcagcccag
aaggctgaagctgcagagatgaaaaaattgcagaaagaaaagcaaaagtgggagaaaggg
aagtttgctctaaaatccattgtggctgaaatcgatgctaaagtaattgaactggggtca
gttggaggacatctgcttacaaggttcgctgaaaaggggcttacataccgtataacttcg
aatccaattgaaagatcaattgtgtggactatgactgttccagaacatatctcacagatt
tcttctaatggaatggagattccatacatattgttcgtatatgaagccgaagaattctgc
aatcttgtcatcaatgaatctcttctcgatcacgtttccagtgttcgaagtcgttaccca
agttacacaatttgctgcctcaccagtaggttaatgtcatatattaataaaagggaacag
gaaaagtacaagaatccgtcaaataataatggttggagtcgtccacctgttgaggaggtg
atggcaaaattaaccactcatttcagtaaggttcattccaggcaatgcatggatgaagct
gaactagctgaacatgttgttggtttgacctccagcctggcatcttgccaatatagaaag
aagttgacgcgcctatctgtaaatgctaatgggtccgtgattcctaaggatgctgttgac
cggaatctaattaaaaagaacttatggttgaaagctttgatatcaattccaaaggttcag
ccacgatttgctactgctatttggaagaagtaccccaccatgaaatctcttctaagtgtc
tacatggaccctagtaaatcagtgcacgaaaaggaatttctcctcaaggacttgacaact
gaagggctgcttggtgaggacagaagattaggtgaggtttgttcaaagagagtgtacaga
atacttatggcacaaagcggaagcatcaaaactgatgatgttgagaatggtgctgatttc
ttcataggccaatcatcttaa
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