Alnus glutinosa (common alder): 133857789
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Entry
133857789 CDS
T10577
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133857789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133857789
03110 Chaperones and folding catalysts [BR:
aglu03110
]
133857789
03029 Mitochondrial biogenesis [BR:
aglu03029
]
133857789
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aglu04147
]
133857789
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133857789
Messenger RNA biogenesis [BR:
aglu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133857789
Chaperones and folding catalysts [BR:
aglu03110
]
Heat shock proteins
HSP60 / Chaperonin
133857789
Mitochondrial biogenesis [BR:
aglu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133857789
Exosome [BR:
aglu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133857789
Exosomal proteins of other body fluids (saliva and urine)
133857789
Exosomal proteins of breast cancer cells
133857789
Exosomal proteins of colorectal cancer cells
133857789
Exosomal proteins of bladder cancer cells
133857789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
133857789
NCBI-ProteinID:
XP_062149120
LinkDB
All DBs
Position
14:complement(22383456..22390816)
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AA seq
580 aa
AA seq
DB search
MYRFASGLASKARLANNINNKIVSGLSWSRNYAAKDIKFGVEARALILRGVEELADAVKV
TMGPKGRNVVLEQSFGAPKVTKDGVTVAKSVEFQDRVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKSRARMIKTSEEIAQVGT
ISANGDREIGQLIANAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLILIHEKKISNLNAIVKVLELALKTQRPLLIVAEDLESDVLATLILNKLRA
GMKVCAIKAPGFGENRKAGLQDLAILTGGEIITEELGLNLEKVGPEVFGSCKKVTVSKDD
TVILDGAGDKKAIAGRCEQLRSSVELSTSDYDKEKLEERLAKLSGGVAVLKIGGASETEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASMELDKLETANFDQKTGVQIIKNALKM
PVYTIASNAGVEGAVVVGKLLEQNDPDGGYDAATGEYVNMIESGIIDPVKVIRTALVDAA
SVSSLLTTTEAVITELPKDEKEVPAMGGGMGGGMGGGFGY
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtaccggtttgccagtggccttgcctccaaggccaggttggctaataacattaacaat
aagattgttagcggattgagttggagccgaaactatgcagccaaagacattaaattcggc
gtcgaagcacgtgcattgattcttaggggtgttgaagagcttgctgatgcagttaaagtg
acaatggggccaaaaggtcgcaacgttgttctggaacaaagttttggggcccctaaagtg
acgaaagatggtgttactgtagcaaagagtgtggaattccaagatagagtcaaaaatatt
ggtgctagtcttgtaaaacaagttgcaaacgctacaaatgatgttgcaggcgatggcacc
acttgtgcgacggttctcactcgtgcaatatttgctgaaggatgcaagtcagtggcagct
ggaatgaatgccatggacctaagacgtggaatttcaatggcagttgatgctgttgtgaca
aacttgaagagcagagcccggatgattaagacatctgaagaaatagctcaggttggaaca
atatcagctaatggagacagagagattggtcagctaatagccaatgccatggagaaagtt
ggaaaagagggtgttattactatctctgacgggaagaccctgtataatgaattggaggtt
gttgagggaatgaagctggataggggttatatttccccttatttcatcaccaatcagaag
aatcaaaaatgtgagctagaagatccactcattttgatccatgaaaagaaaatctcaaac
ttaaatgctatagttaaagtgttggagttggccttgaagacacaaaggcctttactgatt
gttgctgaagatctggaaagtgacgtgctagctactcttattttgaacaagcttcgcgct
ggaatgaaggtttgtgccattaaagcccctgggtttggtgaaaacaggaaggctggtctg
caggaccttgccattctcacaggaggtgagataataactgaagagcttggtctcaacctt
gaaaaggtgggaccagaagtgttcggttcatgcaaaaaggttacagtatcaaaggatgat
actgtcattcttgatggagctggtgacaagaaagccatcgcaggaagatgtgaacagctg
agatcatcggtggaactgagcacttccgattatgacaaggaaaagttagaggaacggctt
gcaaagctttctggtggtgttgctgttttaaagattggcggagctagcgaaacagaagtt
agtgagaagaaggatagagtaactgatgctctaaatgccaccaaggctgccgtagaggaa
gggattgtacctggtggtggtgttgcacttctctatgcctcaatggagctggacaagttg
gaaacagcaaactttgaccaaaagactggcgttcagattattaagaatgctcttaagatg
cctgtctacacgattgcttctaatgctggagttgagggggcagttgttgttggcaagctg
ttggagcaaaacgatcctgacgggggatatgatgcagctacaggtgaatatgtaaacatg
atagagtcaggaattattgatccagtgaaagtcattaggactgccttggttgatgctgct
agtgtctcgtcactgttgacgacaaccgaggcagttatcaccgagctccccaaggatgag
aaggaagtcccagctatgggaggtggtatgggaggtggaatgggcggcggcttcggttat
tga
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