Alnus glutinosa (common alder): 133857860
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Entry
133857860 CDS
T10577
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133857860
Transcription machinery [BR:
aglu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
133857860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
133857860
NCBI-ProteinID:
XP_062149206
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Position
1:complement(51658665..51662875)
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AA seq
517 aa
AA seq
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MGVVTVSSSAARTPLGLSAKFSAQRSTLKIPLIVAFKADKSNSTALVAPQDQIPLPIETS
KDRRKRRGKANKPLRRVKAVITDEASPSTTLGVDYNEAATQLENIYKLSPASDASDVENV
VGGMMRKSQRRRKISGGDEKAERRTGYNVIKNQTKKVKRLSLDKRIALKKNEEDKVVAPM
RKRKDVKDENVKIEQLVREYSASTDLVSLDWKKMRIPPVLPSSEHAWLFKLMQPMKALLQ
VKENLQKDLGREPTEGELAEAMNMKVVQVQKRMGVGRAARNKLIKHNLRLILFVINKYFQ
DFANGPRFQDLCQAGVKGLITSIDRFEPKRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSF
GLESVRVEIQRAKLELLFELHRLPTEEEIVKKVGISPERYHEVMKAAKPVFSLHSRHAIT
QEEYIKGITDVDGVGADNWRQPALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGE
IAGNLNISREMVRKHEVKALLKLKHPARVDYLRQHLV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttccagctcagctgctcgaactccgcttggtttgagtgcgaaa
ttctcagctcaacgctctactttgaaaataccattgatagtagcttttaaagcagataaa
tccaatagcactgcattggtggcaccacaggatcagatccctttacccatagaaaccagt
aaggatagacggaagagacgaggaaaagctaacaaacctttgagaagagtaaaagctgtc
attacagatgaagcttctccgagtaccaccttgggagtggattacaatgaagccgccacc
cagcttgaaaacatatacaagctaagcccagcatctgatgcttctgatgtggaaaatgtt
gtaggtggcatgatgagaaaaagccagcggaggaggaagattagtggaggtgatgaaaaa
gcagagaggagaaccggctataatgtgattaagaaccaaacaaagaaggttaaaaggttg
agtcttgataaaaggattgcgttgaaaaagaacgaggaagataaagtggttgctccaatg
cggaagaggaaagatgttaaggatgaaaatgtgaagattgagcagcttgtaagggagtac
tcggcttcaactgatttggttagtttggactggaaaaaaatgaggatacctccagttctt
ccttcttctgaacatgcttggttgttcaagttgatgcaacctatgaaggcactccttcaa
gtgaaagagaatttgcaaaaagatttggggagagaaccaacagaaggcgaactagctgaa
gcaatgaatatgaaagtagttcaagtacaaaaacgcatgggggttggtcgagctgcaaga
aacaagctcattaagcacaatctccggctcattttgtttgtaatcaacaagtattttcaa
gactttgcaaatggcccaaggtttcaagacctttgccaggcaggagtgaagggacttatt
acatccattgatcgttttgaaccaaaaaggagattccggctctccacttatagtcttttt
tggattaggcatgccattatacgctccatgacactctcaagctttactcgtgtttctttt
ggcctcgaatcggttagagtagaaatccagcgagccaagcttgagttgttgtttgagctt
catagattaccaacagaggaagagatagtaaaaaaagttggtatctcccctgagaggtat
catgaagttatgaaagccgcgaaacctgttttctctcttcattcaaggcatgcaatcaca
caagaagagtacattaaggggatcactgatgttgatggtgttggagctgataactggagg
caacctgctcttctcaggcttgctcttgatgatgtgcttgattctctaaagcccaaggag
agcttggtaatgaggcaaagatatgggcttgatggtaaaggtgatagaacattgggagag
attgctggcaacttaaatatttcaagagaaatggttcggaagcatgaagtcaaggcttta
ctgaagctcaagcatccagctcgagtggattatcttcgccaacatttagtataa
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