Alnus glutinosa (common alder): 133857950
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Entry
133857950 CDS
T10577
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03030
DNA replication
aglu03410
Base excision repair
aglu03420
Nucleotide excision repair
aglu03430
Mismatch repair
aglu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133857950
03410 Base excision repair
133857950
03420 Nucleotide excision repair
133857950
03430 Mismatch repair
133857950
03440 Homologous recombination
133857950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aglu03032
]
133857950
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133857950
Enzymes [BR:
aglu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133857950
DNA replication proteins [BR:
aglu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
133857950
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
133857950
MMR (mismatch excision repair)
DNA polymerase delta complex
133857950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
DUF8639
Motif
Other DBs
NCBI-GeneID:
133857950
NCBI-ProteinID:
XP_062149325
LinkDB
All DBs
Position
14
Genome browser
AA seq
1087 aa
AA seq
DB search
MSKNGNSRKRPAPPQKTLPAQAPKHQAVSQEDEFVDEDVFLDETLILEEEEILRDIEDRR
ALACRLAKWVRSPLSDDYVSQSRSILFQQLEIDYVIGESQKELLPNSFGPAAIIRIFGVT
REGHSVCCHVHGFEPYFYISCPPGMGPDDISRFHQILEARMREVNRNGKVPKYVRRIELV
QKRSVMYYQQQTSHPFLKIVVALPTMVTSCRGILDRGIQIDGFGVKSFVTYESNVLFALR
FMIDRDIVGGNWIEVLAGKYKKTAKNLSYCQLEFDCLYSELISHAPEGEFSKMAPFRILS
FDIECAGRKGHFPEPTHDPVIQVANLVTLQGEDQPLIRNVMTLKSCSPIVGVDVMSFNTE
TEVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAETLRIAEFPILGRIRNSRVRVKDT
TFSSRQMGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSII
SDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIK
VLSQLLRKAKQRDLVIPNVKQAGSEQGKYEGATVLEAKAGFYEKPIATLDFASLYPSIMM
AYNLCYCTLVTPEDVRKLNLPPECINKTPSGETFVKSNLQKGILPEILEELITARKRAKA
DLKDAKDPLEKAVLDGRQLALKISANSVYGFTGATVGQLPCIEISSSVTSYGRQMIEHTK
KLVEDKFTMIGGYEHNAEVIYGDTDSVMVQFGVDNVEAAMNLGREAAEYISATFIKPIKL
EFEKVYYPYLLISKKRYAGLLWTNPEKFDKMDTKGIETVRRDNCLLVKNLVTECLHKILI
DRDIPGAVQYVKNTISDLLMNRMDLSLLVITKGLTKTGDDYEVKTAHVELAERMRKRDAA
TAPNVGDRVPYVIIKAAKGAKAYEKSEDPIYVLENNIPIDPQYYLENQISKPLLRIFEPI
LKNASRELLHGSHTRSISISTPSNSGIMKFAKKQLSCIGCKALISDKDRILCSHCKGREA
ELYCKTVTHVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMGEAKL
QLDRWSF
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaacggaaactcccggaaacgcccagcgccgccgcagaaaaccttgccggca
caggcccccaagcaccaggcggtgtctcaagaagacgagttcgtggatgaggacgtcttc
cttgacgaaaccctcatcctggaggaggaggagatcctccgcgacatcgaggatcgccgg
gccctcgcgtgccgccttgccaagtgggttcgctctcccctctccgacgactacgtctcg
cagtctcggagtatcctttttcagcaattggagattgattacgtgatcggggagagtcaa
aaagaattgttgcccaattcttttgggcccgccgccattatccgcattttcggggttact
agggaaggacatagtgtttgctgccatgttcatgggtttgagccatatttttacataagc
tgccctccaggaatgggccctgatgatatctcccgttttcatcaaattcttgaggcaagg
atgagagaggtgaatcggaatggtaaggtacccaaatatgtccgtcgtattgaattggtg
cagaaaagaagtgtcatgtactaccagcagcagacttcccatccatttctcaaaattgta
gtcgcattgccgacaatggtaaccagctgccgaggaattcttgatagaggcattcaaatt
gatggttttggtgtgaagagctttgtgacatatgaaagcaatgttctctttgctcttcgt
tttatgattgaccgcgacattgttggtggcaattggattgaagtactggctggaaaatat
aagaagactgcaaagaatttgtcgtactgccaattagagtttgattgcctgtattcagaa
ctcatcagccatgccccagaaggggaattctcaaagatggctccatttcgcatattgagt
tttgacattgagtgtgctggtcgtaaaggtcattttccggagcctacccatgatcctgtt
atccaggtggccaatctagttactttgcagggagaggaccagccattaattcgcaacgtg
atgaccctcaagtcatgctctccgattgttggtgtcgatgtgatgtcttttaatacagaa
acagaagtcttgctagcttggagggattttatccgtgaagtggaccctgatatcataatt
ggatataacatatgcaaatttgatttgccatatctaattgagcgggctgagaccttgcga
attgctgaatttccaatactgggccgtatcaggaatagcagagttcgggtcaaagatact
actttttcttcaagacagatgggaaccagggaaagtaaagaagtaacagtagaagggaga
gttcaatttgatttgctccaggttatgcaacgggattataagttaagttcttattcattg
aattctgtctcagcacacttcctctctgagcagaaagaggatgtacaccattcaataata
tctgatcttcagaatgggaatgctgaaacgaggaggcggcttgctgtatattgtttgaag
gatgcttatctcccacagcggcttttggacaaactgatgttcatctacaattacgtggag
atggctcgagtaactggtgttcctatctcttttcttctttctagagggcaaagcatcaag
gtactttctcaacttcttaggaaggcaaaacaaagggaccttgttattccaaacgtcaaa
caggcaggatctgaacaaggaaaatatgaaggtgccactgttttggaggcaaaggcagga
ttttatgagaagccaattgcaacattggattttgcatccttgtatccatctattatgatg
gcatataatttatgctactgcactttggtgacacctgaggatgttcgaaaactcaacctg
cccccagaatgcatcaacaaaaccccatctggtgaaacatttgttaaatcaaatttgcag
aagggaatacttcctgaaattcttgaagaactaataacagctcgtaagagagcaaaagca
gatttgaaggatgcaaaagatccacttgagaaggcagtgctagatggtcgacagctggcc
ttgaaaataagtgcaaattctgtttatggatttacaggagctactgttggtcagttacca
tgcatagagatatcttcaagtgttacaagctatggtcgacaaatgattgagcacacaaaa
aaacttgtagaagataaatttacgatgattgggggctatgaacacaatgctgaggttata
tatggggatacagattctgttatggtacaatttggtgtcgacaacgtggaagcagccatg
aacttggggagagaagctgctgaatatattagtgcaactttcattaaaccaatcaaactc
gagtttgagaaggtttattatccatatcttctgatcagcaagaagagatatgctggtttg
ctatggacaaatccagaaaagtttgacaaaatggacactaaaggcattgaaacagttcgt
agagacaattgtttgttggtcaaaaacctggttactgagtgcctgcacaaaatacttatt
gaccgggacattcctggggcagtccagtatgtcaagaataccatttcagatcttcttatg
aaccgcatggatttgtcgcttttggttattactaagggtctgacaaagacaggagatgat
tatgaagtaaagacagctcacgttgaacttgctgagcgcatgcgcaagcgagatgctgct
actgctccaaatgttggggatcgagtaccttatgtcatcattaaagctgcaaaaggtgcc
aaggcttatgagaagtcagaggatcccatctacgtcctagagaataacataccaatagac
ccccaatactaccttgaaaatcaaattagcaagccacttctaagaatttttgagcccatt
ttgaagaatgctagcagggaactactccatggaagtcacacaagatctatctctatctct
actccctcaaacagtggcataatgaaatttgcaaagaagcaactcagctgcattggctgc
aaagctctaattagcgataaagatcgaattctctgctcacactgtaaaggaagagaagct
gaactttactgcaaaacagtgactcatgtatctgagctagagatgctttttgggaggctg
tggacacagtgtcaagagtgccaaggctctctacatcaggatgtgctctgcacaagtcga
gattgtccaatattttaccggagaaagaaggcacagaaagacatgggtgaagccaagctg
caattagaccggtggagcttctaa
DBGET
integrated database retrieval system
