Alnus glutinosa (common alder): 133858158
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Entry
133858158 CDS
T10577
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133858158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133858158
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
133858158
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
133858158
NCBI-ProteinID:
XP_062149602
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Position
14:5178368..5191880
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AA seq
1104 aa
AA seq
DB search
MQRQKSILSFFQKPSQENNGSGAGNVLGSRRVPQSTEKKEKRKDAASNQATSDNMMDSSL
EIRGTDTPPEKVPRQVFPATFPANEKNGGSSLFSSIMHKFVKINDREKSTERNQAHGGSA
NVCTISGKYSEPDGLPKQDVAAQHCRKGDIVNSNGIIDQGYDMHIEIDDDIHGPETPGMR
PVVPRLKRLQEDSPKSGVKNDSSLFDSSKRLKLLQDTTALNKNHLTLSDTVSKFEWLDPA
RIKDANGRRPSDPLYDKKTLYIPPDTLKKMSASQKQYWSVKCLYMDVVLFFKVGKFYELY
ELDAEIGHKELDWKMTLSGVGKCRQVGISESGIDDAVQKLVARGYKVGRIEQLETSVQAK
ARGADSVIQRKLVQVVTPSTTNDGNIGPDAVHLLAIKEGNCDPDNGSVVYGFAFVDCAAL
RIWVGSISDDASCAALGALLVQVSPKEVIYENRGLSKEAHKALRKFSLTGPAMLQLSPVQ
SLIDFQNASEVRNLVRLKGYFKGSSNSWNHVLDSVIHHDIALCSLGGLIGHLSRLMLDDV
LRNGDILPYQVYQGCLKMDGQTLVNLEIFSNNADGGQSGTLYKYLDHCVTSSGKRLLRNW
ICHPLKDIEGINNRLNVVEDLMAHSEIMLLFAQYLRKLPDLERLLGRIKASVQSSASLLL
PVVGKKVLKQRVKVFGSLVKGLRIGLDFLMLLQNEGRIISSLSKVFRLPRLSGNDGLDQF
LTQFEAALDSDFPNYQNHDVTDSDAETLSILIELFIEKATEWFEVTYAISCIDVLRSFAV
TANCSCGAMSRPVILPQSENLTGGQEIRGPILQVKGLWHPFAFGENGGIPVPNDMILGEN
KDGHHARTLLLTGPNMGGKSTLLRATCLAVILAQLGCYVPCEMCVFSLVDIIFTRLGATD
RIMTGESTFFVECTETSSILQSATQNSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNC
RLLFATHYHPLTKEFASHPRVTLQHMACAFESKSERRSKGDQELVFLYRLASGACPESYG
LQVAIMAGIPEQVVEAASKARQVMKKSLGKSFRSSEQRSEFSTLHEQWLNMLMAASKSED
CNFDDTDDFDTLFCLWHELKSSSI
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccaaaaatctatactctccttttttcaaaaaccctcgcaggaaaacaacggc
tccggtgctggaaatgtgctcggcagccggcgagttccgcagtctacggaaaagaaagag
aagcgtaaagacgccgcttccaatcaagctacgagtgataatatgatggactcgtctctt
gaaatcagaggaaccgacacaccgccagagaaggtgccacgtcaggttttcccggcgacg
ttcccggcaaatgaaaagaacggaggttcttcactgttctcgagtattatgcataagttt
gtgaagattaatgatagagaaaagtctactgagaggaaccaggctcatggtggttctgct
aatgtttgtactatatctggtaaatatagtgagccggatggattgcctaaacaagacgtg
gctgcccaacattgcagaaagggtgatattgtcaattctaatgggataattgatcaagga
tatgacatgcatattgagattgatgatgacattcatgggccagaaacacccggtatgcga
cctgttgttcctcgtttgaagcgattgcaagaagatagtccaaagtctggggtcaagaat
gacagttccttattcgattcaagcaaaaggttgaaactacttcaggatacaacagccttg
aacaagaatcacttaacattatctgatacagtgagcaagtttgagtggcttgaccctgct
cgaatcaaggatgctaatgggcgaaggcctagtgatcctctttacgacaagaagacgctg
tatataccgccagacacattgaagaaaatgtcagcatctcagaagcaatattggagtgtc
aaatgtctatacatggatgttgtgcttttctttaaagtgggaaagttttatgagctttat
gaactcgatgccgaaattggccataaggagcttgattggaaaatgacattaagcggtgtg
gggaaatgtcggcaggttggtatatctgaaagtgggatcgatgatgctgttcaaaagctt
gttgctcgtggatataaagttggacgaatagagcagttggaaacatctgttcaagcaaaa
gccagaggtgcagattctgtaattcaaagaaaattggttcaggtagtcacaccatcaacc
acaaacgatggtaatattgggcctgatgctgttcatcttcttgcaataaaagaggggaat
tgtgacccggataatggttcagttgtgtatggctttgcttttgttgactgtgctgcttta
agaatttgggttggttccatcagtgacgatgcatcctgtgctgctctgggggctttactg
gtgcaagtgtcgccgaaagaagttatatatgagaatagagggctgtcaaaagaggctcat
aaagcactcagaaagttttcattaacaggtcctgcaatgctgcaattaagtccagttcag
tcacttatagatttccagaatgcttctgaagttagaaatttggtgcggttgaagggttac
tttaaaggatcttctaattcgtggaatcatgtacttgatagtgtgatccaccatgatatt
gccttatgttctcttggcggacttattggtcatctatcaaggttgatgttagacgatgtt
ttacggaatggagatatattaccgtatcaagtttatcagggttgcctcaaaatggatgga
cagacactggttaatcttgagatattcagtaataatgctgatggtggtcaatcaggtaca
ttgtacaaatatcttgatcactgtgtgacatcatctggtaagcggcttttaaggaattgg
atctgccatccactaaaagatattgaaggcataaataataggcttaatgtggttgaagat
ctaatggcacattcagaaattatgttgctttttgctcaatatcttcgcaagcttccagac
ttagaaaggttgcttggacggattaaagctagcgttcagtcatcagcttctttgttactg
cccgtggttgggaaaaaagtattgaaacagcgagttaaagtgtttggctctcttgtgaaa
ggcctgcgtattggattggatttcttaatgctattacagaatgaagggcgtataatctca
tctttatcaaaggtttttagacttccacggcttagtggtaatgatgggctggatcaattc
cttacccaatttgaagcagctctagatagtgacttcccaaactaccagaatcacgatgtg
acagattcagatgctgaaactctctctattctgatcgagttatttattgaaaaagctact
gaatggtttgaagtcacatatgccatcagttgtatcgatgtactaagatcttttgcagtc
actgctaattgttcatgtggggctatgtccagacctgttattttgcctcaatctgaaaat
ttaactgggggccaagagatcagaggacccatacttcaagttaaagggctttggcatcca
tttgcctttggagagaatggaggaatacctgtcccaaatgacatgatccttggtgagaat
aaagatggccatcatgcccgaactttgctactgactggaccgaatatgggcgggaagtca
accctcctgcgtgcaacatgtctagctgtcatactggcccagctgggctgttatgtcccc
tgcgagatgtgtgttttctcactggtggacattatcttcacccggcttggtgctactgac
agaatcatgactggggagagtaccttctttgttgagtgcacagaaacatcatccattctc
caaagcgccactcaaaattctttggttattcttgacgaattgggtcgaggaacaagcact
tttgatggatatgccattgcatatgcggtattccgccatttgattgaaaaggttaactgt
cgactactctttgctacacactaccacccacttacaaaggaatttgcttcccatccacgt
gttacactgcaacacatggcctgcgctttcgagtcaaaatctgagcgccggtcaaaaggt
gatcaggagctggtttttctataccggcttgcctccggagcatgcccagagagctatgga
ttgcaagtggcaataatggctggaatcccagaacaggtggttgaagctgcatcaaaggct
cgccaagttatgaaaaaatcacttggcaaaagttttaggtcaagtgaacaaagatcagag
ttctccactctccatgaacagtggttgaacatgctaatggcagcatctaaaagtgaagat
tgtaattttgacgacactgatgattttgatacgcttttttgcttgtggcatgagctaaag
agctcctctatatag
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