Alnus glutinosa (common alder): 133858383
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Entry
133858383 CDS
T10577
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133858383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133858383
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133858383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
133858383
NCBI-ProteinID:
XP_062149827
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All DBs
Position
1:1860090..1863816
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AA seq
387 aa
AA seq
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MFGAQAPPSAFGTPSSTSAFGTSSSTPAFGTPSTTPTFGTPSANPVFGTPSTTPAFGTQT
TPSFGTGYGSSLFATPFSAQPQQQQQQQSPLFQQSSSTFGFQTTPFSAPQPGTFSGAQLT
TQMAPVAPLPFSLADRDIQAIVDAYKDEPGNPKYAFKHLLFSVTDPRSRVKPAGVSDIMW
AEAMGKLEGMESADRERLWPQLVQGFKDLSQRLKIQDDVIVSDAERLRITQSNVKMLQRH
FQADTLPRIDRMRQKEQVLQRRLLRVMRIVEAMEGKGFRLPLTKGEAELAEKLAATTRQL
KGSGAELSRRVQNLLTLSRVQANGFGAGGSVYLPGSTKIHEQSLADMQEVLQQQTEAIAR
LGNVLKRDARDMEIIMAEDTHLTEDLS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaagctcccccctccgccttcggcactccctcttcaacgtcagcattc
ggcacttcatcttcgactccagcgtttggtactccgtctacgacaccgacattcggcact
ccgtctgcgaacccagtgtttggcacgccgtctacgaccccggcgttcgggactcaaacg
acgccgtctttcggcaccggatatgggtcctcgctcttcgccaccccgttctcggctcag
cctcagcaacagcaacagcaacagagtcctttgtttcagcaatcgtcctccacgttcggc
ttccaaacgacaccgttctctgcgccgcagcccggtactttctccggcgcgcaattgact
actcagatggctcccgtggcccctcttcctttctctctcgccgatcgcgatattcaagct
attgttgacgcttacaaggacgagcctggaaaccctaaatatgcttttaagcatttgttg
ttcagcgtcacggatccacggtctagagtgaagcctgctggtgtatcagatattatgtgg
gcagaggctatgggaaagctggagggtatggaaagtgctgaccgggagcgcctgtggcct
cagcttgtgcagggttttaaggatctttcacagcgtcttaagatccaagatgatgtcatt
gtttcagacgctgagaggttacgaattacccaaagcaatgtgaagatgcttcaaagacat
tttcaagctgacacccttcctcggattgatagaatgagacagaaagagcaagttcttcaa
aggcgtcttttgagggtaatgagaattgtggaggccatggagggtaagggtttccgatta
cccctaacaaaaggggaagctgaattggccgaaaagttagctgcaacaactagacagctg
aaaggatcaggagcagaactttctaggagggtacaaaacctgctgactttgtctcgtgtt
caagcaaatggctttggtgctggcggttctgtttatcttccaggatcaaccaaaatacat
gaacagagccttgctgatatgcaggaggtcttacaacagcagacagaggccattgctagg
cttggcaatgttttgaagcgagacgccagggacatggagatcataatggctgaggacaca
cacttgacagaagatctgagctaa
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