Alnus glutinosa (common alder): 133859735
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Entry
133859735 CDS
T10577
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aglu03000
]
133859735
03036 Chromosome and associated proteins [BR:
aglu03036
]
133859735
Transcription factors [BR:
aglu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
133859735
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
133859735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
CHDNT
Motif
Other DBs
NCBI-GeneID:
133859735
NCBI-ProteinID:
XP_062151234
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All DBs
Position
2:35006550..35013413
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AA seq
643 aa
AA seq
DB search
MTDGHLFNNISLGGRGGTNAGQLKIYSGGILWKKQGGGKAIEVDKADIMGVTWMKVPRTN
QLGVRIKDGLFYKFTGFRDQDVTSLTNFFQNTCGITPEEKQLSVSGRNWGEVDLNGNMLA
FMVGSKQGFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDSTLSIN
DDLLNTKYKDKLDPSYKGLIHEVFTTIMRGLSSAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIEYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDVQTADGVARVLQDEEDDAVDPHLERIKNLAGGDESDE
EDEDFVIDKDDGGSPTDDSGEEESDASESGDEKERPAKKESKKEISSSKASSSKKKSKDG
DEEGSKKKKQKRKKDPNAPKRALSGFMFFSQMERENIKKSNPGIAFTDVGRVLGDKWKKM
TAEEKEPYEAKARQDKKRYKDEISGYKNPQPMNIDSGNESDSA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggccacctcttcaacaatatctctctcggaggccgtggaggcactaatgca
gggcaacttaagatatattcaggagggattttatggaagaaacaaggaggtggtaaggca
attgaggtggataaagctgatatcatgggggtcacatggatgaaggtcccaaggacaaat
caacttggtgttcggatcaaagacgggttattctataagttcactgggttccgggaccag
gatgtcactagtttgaccaatttcttccaaaacacttgtggcataacgccagaggagaag
caactttctgtcagtgggcgtaattggggagaagttgatttaaatgggaatatgctggcc
tttatggttggttcaaagcaaggatttgaggtatctctagcagatgtctcacaaactcag
cttcaagggaaaaatgatgtaatcttagagttccatgtggatgacacaaccggagctaat
gagaaagattcattgatggagattagttttcacatacctaattccaacacccaatttgtt
ggtgatgagaatcgtcctcctgctcaggttttccgtgacaaaatcatgtcaatggcagat
gttggtgctggaggtgaagaagctgtggttacctttgagggcattgcaatcctcacgcca
aggggccgatacaatgttgaacttcatctttcattcttacggctccaaggacaggctaat
gatttcaaaattcaatacagcagcgttgttcgcctgtttttacttcctaagtctaaccag
ccacatacatttgtagttgtgactcttgatccaccaatccgtaaagggcaaactttatac
ccacatattgtgctgcagtttgaaactgactatgtagttgatagcaccctttcgataaac
gatgatctattgaacaccaaatacaaggacaagttagacccatcatataaggggctcatt
catgaagttttcactacgataatgcgtggcttgtccagtgccaaagttactaaaccagga
aaattccgaagttgtcaagatggttatgcagtgaagtcatcattgaaggctgaagatggg
gtcctgtatccacttgaaaagagtttcttctttctaccaaaacctcctacacttatcctt
catgaagagattgagtatgtggaatttgagaggcatgctgctggtggctcaaatatgcat
tacttcgaccttcttataagactcaaaactgagcaagaacatctatttcggaacatccag
agaaacgaataccataatctttttgacttcatcagtgggaaggggttgaaaattatgaac
ctgggagatgtccaaaccgcagatggtgttgcacgtgttcttcaggatgaagaagatgat
gctgtcgacccacatcttgagcgcatcaagaatctagctggtggagatgagagtgatgaa
gaggatgaagattttgttattgacaaagatgatggaggttctccgactgatgattctgga
gaggaggaatctgatgctagtgaaagtggagatgagaaagagaggcctgcaaaaaaagaa
tccaaaaaagagatttcatcttccaaggcatcttcttctaagaagaagtctaaagatgga
gatgaagaaggttcaaagaagaagaaacagaaaaggaaaaaggatccaaatgcaccaaag
agggcgctgtccggtttcatgttcttctcacaaatggaaagagagaatataaagaagagc
aacccaggaatcgcatttacggacgtggggagagtacttggagataagtggaaaaagatg
acagctgaggagaaagagccatatgaagcaaaggctcgtcaagacaaaaaacgttacaag
gatgaaatcagtggctacaagaacccacaaccaatgaatatagattcagggaatgaatct
gatagcgcatag
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