KEGG   Alnus glutinosa (common alder): 133859811
Entry
133859811         CDS       T10577                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    133859811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aglu03400]
    133859811
DNA repair and recombination proteins [BR:aglu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133859811
SSDB
Motif
Pfam: XPG_N XPG_I UBM EBNA2_Core
Other DBs
NCBI-GeneID: 133859811
NCBI-ProteinID: XP_062151334
LinkDB
Position
2:complement(35772383..35784308)
AA seq 1714 aa
MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLLGFFR
RICKLLFLRTKPVFVFDGATPALKRRTVIARRRQRDNAQAKVRKTAEKLLLNQLKAMKLK
ELAKDIEKQKQKSTDAKILSDQTNMVGNRLEGEDMILKSSNQEKLDEMLAASIQAEEDGR
FTNKASTSSAVAIPSEEEDDNEEEEMILPAEHGEVDPAVLAALPESMQRNLLAQLKGKKL
AADVENQRQLQDDDAKGKKNLSDETDMFGCSSNGDDLVSRSDIQEKLDEMLAASILAEEN
GRLANSASKSVAHLSSEEEVGEEYEDEDEDEEMMLPAMNGEFDPNVLAALPPSMQLDLLV
HMRERLIAENRQKYQKVKKDPTKFSELQIQAYLKTVAFRREIDEVQKSASGRGVGGIQTS
RIASEANREFIFSSSFTGDKQALTSTKAQRNGDKSQETHREMPSQESINGVASTSKSNTM
TGSDLDESRTVFDDNIETYLDERGRVRVSRVRAMGIRMTRDIQRNLDLMKETEQESASAK
NIANTQTMLDRNEISVPRSFPSKNQSVQASHDDNSESVNLNEKNEESMLKNDTSMEISFE
DDEKNKCFDGDDDLFAHLVAGNPVKISSTDNASSRKQPSDLHCDWVEGIIKEKGNSLYSD
VGAETKPSLEEGNVSDESDVEWEEEVCDFHKSTSLCQAESGRAVSKGHMEEEADLEEAIR
RSLEYVGDKESNIEIAQDEKNYGEKVHKEIGIFDQKNNMGGELLPGQNGTQENESFCEIV
DGVEKPDSVAGVTVLQTVDSSGQQLMSSVACNSDNTRVLINKPHEKYPYSCSGQSMQDAR
ESGSLDREMPCAESVIPLEKEEVHVITEHLLDTFRVGSGLSNSPNYGSEGNSHISDTISG
VNTNDFQIGDKINDTKAASVHRFTDMINPNFPLRKLSTKDSTDDLDFQQNLAAEKKIDNN
IEERKHNKDNSPFEGNENLQVEVTEGNLDEEMLIGNLNEEMLILDQEYLNLGDEQRKLER
NAESVSSEMFSECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGAR
SVYKNIFDDRKYVETYLMKDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVVN
AFPEEDGLCKFREWIESPDPTILKKFDAETGSSAKKRGPKVGDNGLNCSKSSTEEVSASD
LNISQAQEQKQSAIYMHDIKQIFMHKHRNVSKNWHIPSSFPSEVVISAYFSPQVDKSTET
FTWGKPDHFVLRKLCWEKFGWATQKADGLLVPVLKEYDKHETQLRLEAFYTFNERFAKIR
SKRINKAVKGIAGNQTSDLMDDPLQEVSKSRKKRRVSQVDNNSEKPSKKLDENDVRNQSN
YMDKSTPKHSRKRRNAGEPVPSIEKSTEPPMEAQGRRSHNRASRGTGRSRGRGRGRGIGR
GRGKSSGFEPCESTSGDSDDDEQEVLAKKLEGPDEMRRSTRVRKPVNYTVNHFEVDDVDK
SSDKSDKEFADEAAVEQDISLAQVVCGDAAAVHNEKKQHNAGHPALEECLHSDYLEMGGG
FCTDKCEIGQPDVSQCGDPSFGTEFSKDYLNMGGGFCLDEGEPEDDQDGAYGPASATASG
NADLSHRSGFLDEADIDDGSVHSNLVPKGGLNGLQDRGKMDAYDTTLNVDHLNTSSNDGN
SKGSLQENTKDDTGTTSVGGLSAMPFLRRKRRKS
NT seq 5145 nt   +upstreamnt  +downstreamnt
atgggagtgcacggtctgtgggagctactggctcccgtcggccgccgcgtgtccgtcgaa
accctggccggaaaaaagctcgccatcgatgcgagcatttggatggtgcagttcatgaag
gcgatgcgggacgagaagggcgagatggtacggaacgcgcacttgctcggcttcttccgc
cggatctgcaagctcttgttcctcaggaccaagcccgtcttcgtcttcgacggcgccacc
cccgcccttaagcgccgcactgtcatcgcccgccgccgacagcgcgacaacgctcaggcc
aaggtccgcaagactgccgagaagttgcttctcaatcagcttaaggcaatgaagctgaaa
gaactggcaaaggatattgagaagcagaagcaaaagagtactgatgccaagattttgtca
gatcaaaccaacatggtggggaatcggttagaaggggaggatatgattttaaagagttcc
aatcaggagaaactagatgaaatgttggcagcatctattcaggcagaggaagatgggagg
ttcactaacaaggcatcaacatcttctgctgttgctataccttctgaggaggaggatgac
aacgaagaggaagagatgatactgcctgcagagcatggcgaagttgatccagctgtatta
gctgctttgcctgagtcgatgcagcgcaatcttcttgctcagctcaagggaaagaagttg
gcggcggatgttgagaaccagagacagttgcaggatgatgatgctaagggtaaaaagaat
ttgtcagatgaaactgacatgtttggttgtagttcaaatggtgatgatctggtatcaagg
agtgacattcaggaaaaactagatgaaatgttggcagcttctattttggcagaggaaaat
gggaggttagctaacagtgcatctaaatctgttgctcatttatcttctgaggaggaggtt
ggcgaagaatatgaagatgaagatgaagatgaagagatgatgctgcctgcaatgaatggt
gaatttgatccaaacgtattggctgctttgcctccatcaatgcaacttgatcttcttgtt
catatgagagaaagattaattgcggaaaacagacaaaagtatcagaaagtcaagaaggat
cctacaaagttctctgagctgcaaatacaagcttatcttaaaactgttgctttccgtcga
gagatagatgaagtgcagaaatctgcttcagggaggggggtaggaggtatacagacttct
cggattgcctccgaagcgaacagagaatttattttctcatcatcatttactggtgataag
caggcacttacatctaccaaagcacagagaaatggagataagtcacaagagacacacaga
gagatgccttctcaagaatctatcaatggtgttgcatctactagtaagtccaataccatg
actggttcggacctggatgaatctagaacggtttttgatgacaatatcgagacatatttg
gatgagagggggcgtgttcgagtcagtagagtgagagcaatggggatccgtatgactcgt
gatatacaaagaaatttggatttgatgaaagagactgagcaggagagcgcaagtgcaaaa
aacattgcaaatactcaaaccatgctcgacagaaatgaaattagtgtcccaagaagtttt
cctagtaaaaaccagtctgtacaagcttcacacgatgataatagtgaatctgttaacttg
aatgagaaaaatgaggagtccatgttaaaaaatgacacttccatggagatatcctttgaa
gatgatgagaagaacaagtgttttgatggtgatgacgatctatttgctcatttagttgca
gggaatccagtaaaaatctcttctactgacaatgcctcatcaaggaagcaaccttctgat
cttcactgtgactgggtggaaggaatcatcaaagagaaaggtaatagtctctatagtgat
gtaggagctgaaactaagccctctcttgaggaaggcaacgtgagtgatgagagtgatgtg
gaatgggaggaagaagtttgtgacttccataaaagcacctccttgtgccaagcagaatca
gggagagcagtttctaaaggtcatatggaagaagaggctgatttggaggaagcaataagg
agaagcctcgagtatgtaggggataaggaatctaatattgaaatagctcaagatgagaag
aattatggagaaaaggttcataaagaaattggaatctttgatcagaaaaataatatgggt
ggggaacttttgccagggcagaatggtactcaagaaaatgagtcattttgtgaaattgtg
gatggagttgaaaagccagatagtgtggctggagtaactgtgttacaaactgttgattct
tctgggcagcagttgatgtcatctgtggcatgtaattctgataacacgcgggtgctgata
aataagccacatgaaaaatacccttattcatgttctgggcaatcaatgcaagatgcaaga
gaaagtgggagtttggacagagaaatgccatgtgctgaatctgtaattcctttggaaaag
gaggaggtccatgtgattacagaacatctattggatacctttagagttggttctggctta
tctaactctcctaactatggttctgagggtaattctcatatttctgataccatatctggt
gtgaataccaatgactttcagattggtgataagatcaatgatactaaagctgcatctgtc
catcgttttactgacatgattaaccctaactttcctctaaggaagttatccacaaaagac
tcaacagatgaccttgattttcagcagaatttggctgctgaaaaaaaaattgacaataat
attgaggaaaggaagcacaacaaggacaattctccctttgagggaaatgaaaatctgcag
gtcgaagtcacagagggtaatttggatgaggaaatgctaattggtaatttgaatgaggaa
atgctaattctcgatcaagaatatttgaatctaggagatgaacagagaaagcttgagcgt
aatgcagaatctgtcagcagtgagatgttttcagaatgccaggaattacttcaaatgttt
ggattgccgtatattattgcaccaatggaagcagaagctcaatgcgcttatatggaactt
gcaaaccttgttgatggtgttgtgactgatgactctgatgtgtttttgtttggggccaga
agtgtttacaagaatatatttgatgaccgaaaatatgttgagacatatctcatgaaggac
attgagaaggagcttggcctgacaagagaaaaattaattcggatggcattgcttcttgga
agtgattatactgaaggtgtcagtgggattggcattgtcaatgctattgaggttgtaaat
gcatttcccgaggaagacggcctctgcaaattccgagagtggattgagtctccagatccc
accatccttaaaaagtttgatgcagaaacaggatcgagtgccaaaaaaaggggaccaaaa
gttggtgacaacggtttgaattgctcaaaaagtagcacagaagaagtctctgcatctgac
ctaaacatctcccaagctcaagaacagaagcagtctgcaatttacatgcacgacataaag
cagatttttatgcataagcatagaaatgtgagcaagaactggcatatcccttcttctttt
ccaagtgaagtggttatctctgcttacttttctccacaagttgacaagtcgactgagaca
tttacatggggaaagccagatcattttgttcttcgcaaattgtgttgggaaaagtttggg
tgggctacccagaaggcggatgggttgctagtacctgttctgaaggagtatgacaaacac
gagactcaattgcggttggaagcattttacactttcaatgaacgatttgcaaaaattcgt
agtaagagaattaataaagccgttaaaggaatcgctggaaaccaaacctcggatttgatg
gatgatcccttgcaagaggtttccaaaagtagaaagaaaagaagagtaagccaggttgat
aacaattcagagaaaccttcaaagaaactagatgagaatgatgttaggaaccaaagtaac
tatatggacaaatcaacacctaagcattcaaggaaaaggaggaatgctggagagcctgtt
ccatctatagagaagagtacagaaccacctatggaggcacaaggcaggcgaagtcacaac
agagcatcgcgtgggactggaagaagcagaggaagagggagaggcaggggaataggaaga
ggaaggggaaaaagttctggttttgaaccatgtgaaagcactagtggtgacagtgatgat
gatgagcaagaagttcttgcgaagaagttagaagggccagacgaaatgcgaaggtcaacg
cgagttcggaagcctgtaaattatactgtgaatcactttgaagttgacgatgtggacaaa
tcatcagacaaaagcgataaagaattcgcggatgaagcggcagtagagcaagatatatct
ttggcccaggttgtatgcggagatgcagctgctgttcataatgaaaagaaacagcataat
gcaggacatcctgctcttgaggagtgcttgcatagtgactatcttgaaatgggaggtggc
ttttgcactgacaaatgtgaaattggtcaaccagatgtgagccagtgtggcgatccttct
tttgggaccgagttttctaaggattacctcaacatgggaggtgggttttgcttggatgaa
ggtgagccagaggatgaccaagatggagcttatggcccagcttcagctactgcctcagga
aatgctgacctatcccatcgctctggtttcttggatgaagctgatattgatgatggttca
gttcattctaacttggtccctaaaggtggcttgaatggacttcaagatagagggaagatg
gacgcttatgataccacgttgaatgtggaccatctaaatacttcaagtaatgatggtaat
tcaaaggggtctctgcaggagaatactaaagatgatactggaacgacctctgtaggaggt
ctaagtgctatgccttttctgagaagaaagcggaggaagagctga

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