Alnus glutinosa (common alder): 133859872
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Entry
133859872 CDS
T10577
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aglu03036
]
133859872
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133859872
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
133859872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR
PPR_2
Sec63
PPR_1
DEAD
PPR_3
E_motif
SNRNP200_wHTH
PPR_long
Helicase_C
ResIII
Rib_mS39_PPR
HHH_5
Cdd1
AAA_22
HHH
Motif
Other DBs
NCBI-GeneID:
133859872
NCBI-ProteinID:
XP_062151412
LinkDB
All DBs
Position
2:complement(36466204..36479732)
Genome browser
AA seq
1981 aa
AA seq
DB search
MKSAFKGLFAINPRKSFGAYVESCVSLLKNVTYQGLVAEGSVIHGHLIKMGISSERYIAV
KLLTMYLNGASSGEAHGIVKEFNGFDLVVDNCLISANFKWGNLDGARQLFEQMPERNEVS
WTALISGLMKYGRVDESMWYFERNPFQNVVSWTAAISGFVQNGFNIEALKLFMKLLESGV
KPNDVTFTSVIRACAGSGEFGLGTSVVGLVIKDGFEHKLSVSNSLITLSLRMGEIALARR
VFDGMVKRDVVSWTAILDMYVEMGDLGEARRVFNEMPVRNEVSWSAMIARYSQSGNPEEA
LKLFCQMVQHGFNANISCFSSVLSALASLKAFRAGMNIHAHVLKIGIVEDVFVSSSLIDF
YCKCGKTKDGRLVFDSNLKKNVVSWNSMIGGYSLNRQMDEAKVLFDNMPIRNNVSWNTMI
LGYTENKQFDKVFEGLHEMLLSGEIPNKSTFSTVLCACASIASLEKGKILHGKTVKLGIQ
HDIFVGTALTDMYAKSGDIQSSKQAFDRMPEKNEISWTLMIQGLAENGFAEESLILFEEM
GRTSPVAPNELMLSSILFACSHSGLVEKGLRYFYSMETVYGIKPKGRHYTCMVDMLSRSG
HLFEAEEFIKSMPFQPENNTWAALFSGCTVYKNEEIAERKAKKLWELEENSAGYVLMSNI
YASAGRWEDVMNIRKLMREKGLKKSGGCSWVELNNQVQSFNSEDGTHSQSVEIREVLELL
RSEMLPRKKSFLQEISLCSSRAPLIRNNFCQETSGTMDSYTLKSVLDLPAHFRSAFNFRY
FNSLQSECFPVCFHSDANMVISAPTGSGKTVLFELCILRLLSKFISEEGRFIHLKGTLKT
IYIAPSKALVQEKLRDWNEKFGSWGINCLELTSDNEFYNVRNIQEADIIVTTPEKFDAVT
RYRIKDGGLSFFGDIALLLIDEVHLLNDPRGATLEAIVSRIKMLARNPEMRSTSLSHVRF
IAVSATIPNIEDLAEWLMVPVQGIKRFGEEMRPVKLTTKVFGYTPAKNDFLFEKRLQNYI
FDILMQYSRGKSALVFCSTRKGAQEAAQCLSQTAMNFGHSNPFIKSKEQQERLREASLSC
SDKQMQSYIIYGVGYHNGGLCLKDRNLIESLFLMGDIQIICTTNTLAHGINLPAHTVVIK
STQHYNKEKGLYMEYDRSTILQMSGRAGRPPFDDTGMVIIMTRRETVHLYENLLNGCEMV
ESQLLSCVTEHLAAEIVQLTVSDITRAIEWMKCSYLYVRMKKNPGNYLVRKGTSSDHKER
DMQEICVQKVNELSRHQMIWTDEDGYLLKPLEPGKLMTKYYLKFDTMKHIMQTPVNCSLE
DALHIICRAEEIAWIQLRRNEKKLLNDINTDKDSRLRFHILGDKGKPKKRIQTREEKIFV
LANECLTGDPSVHDLSLTQDMNSICSNGCRIAKCMKEYFIYMKNYRGALNSTLLAKSLHQ
KLWDDSPYLLKQLPGIGMVTAKALHSMQINSFETLAEADPRRIEIVTCRKFPFGNHIKDS
LLSLPPKVDVKMEEIECQRQGKSKLVVTLTRLSQPVQSTKRHYADMIVGSEEDNLIVFHE
KIRVEEFSSPYSATILLSSPHQGKLTIKADLIFEEYIGIDLHRKLLLMKESNLSMKYKQR
NKQPSSFPPPEEIHIIDDNETTSPAPAKELHNSANSEKENGFLPSFKLLDEEMGEDEPDL
EVEEDECKIITEQTVFDHIREKAKNFPVLATPSIACFPSSEALILTRKLSRQKQLELHSE
VEVLGETDRNKITRPSVVNPSSERSGHGATKCPIPPEPEESTSKTLTGGSIFDHIQKKSK
NFPMINKLKTIDSEPLFWTKEHSSESRAELGTVSSEILNEMNSDEILADTITISDSEPRK
VERDSCVSKQSTKVRHNLFSGSSPGTYGLLNLPPRVSSPTGDLSSIEMLSFDISMLKNNG
QSADPLSNLKSSRKQQCRSREFKRQNCSPSVSRIQCCSSETASETGEADAFLGFKSVFSF
L
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgcctttaaaggcttatttgctattaacccaagaaaaagtttcggggcctac
gtagaatcatgtgtttctctattaaagaatgttacctaccaaggcttggtcgccgaagga
agtgtcattcatgggcatttgatcaagatgggtatttcctcggaaagatacatagccgta
aaacttctcaccatgtaccttaacggcgcaagttctggtgaagctcatgggattgtgaag
gagtttaatgggtttgatcttgtggtggataattgcttgattagtgctaactttaagtgg
ggaaatcttgacggagctcgccagttatttgaacaaatgcctgagagaaacgaagtctcg
tggacagcactgatatcgggtcttatgaaatatggaagagtggacgaatcaatgtggtac
ttcgagaggaacccatttcagaatgtggtttcttggactgcggctattagtgggtttgtg
caaaatgggtttaatattgaagctctgaagcttttcatgaagctgcttgaatctggggtc
aagcccaatgatgttacatttacctctgttattagagcttgtgcaggttcaggtgaattt
ggtttgggaacgagtgttgtggggctggttatcaaagatggatttgaacacaaattatcg
gtttctaattctttaattacattaagcttgaggatgggtgaaattgccttggctaggaga
gtatttgatgggatggtaaaacgagatgttgtttcttggactgcaatcctagacatgtat
gttgagatgggggacttgggagaagcacgtcgagtctttaatgagatgcctgtaagaaat
gaggtttcttggagtgcaatgattgcaaggtacagtcagagtgggaatcctgaagaagca
ttgaaactcttctgtcagatggttcaacatgggtttaacgcaaatatctcttgcttctct
agtgttcttagtgcattggccagcctaaaggcttttcgagcaggaatgaacattcatgca
catgttctcaaaattgggattgtggaagatgtcttcgttagtagttctctaattgacttc
tactgtaaatgcggaaaaactaaagatgggcgtttggtgtttgattcaaatttgaagaag
aacgtggtttcatggaactctatgattggtgggtatagtctgaatagacagatggacgaa
gctaaggtgttgtttgacaacatgcctatccgaaataatgtctcgtggaacactatgatt
ttgggttacacagaaaataaacaatttgataaggtatttgaaggactccacgagatgctt
ttgtcaggggaaatcccaaataagtccaccttctcaactgtgctttgtgcttgtgccagc
atagcctcattagagaaaggcaagatcctccatgggaaaaccgttaagcttggaattcaa
catgacatttttgtgggtactgccctgactgatatgtatgccaaatctggggatattcaa
agctccaagcaggcctttgatagaatgcccgagaaaaatgaaatctcctggactctgatg
attcaagggcttgcagaaaatggttttgccgaggaatctcttattctgtttgaagaaatg
ggaagaacctcacctgttgctcccaacgagctcatgctttcttcaattctttttgcttgt
tctcactctggcttagtcgaaaaaggacttagatacttctattcaatggaaacagtctat
ggcataaagccaaagggaagacactacacctgtatggtggatatgctgtctcgatcagga
cacctctttgaggctgaagaatttataaaaagcatgccatttcagcctgaaaataataca
tgggcagctctatttagtggctgtactgtatataaaaatgaagagattgcagaaaggaaa
gctaagaagctctgggaattagaagagaactctgcaggttatgtattgatgtcgaatata
tatgcttcagcaggtagatgggaagatgtcatgaatatacggaagttgatgagggagaag
gggttgaagaagagtggcggctgtagttgggttgagctgaataatcaagtccaatctttt
aactcagaagatggaacgcactctcaatcggttgaaattcgtgaagttttagaactctta
agatctgaaatgctgccccgcaagaagtcctttttacaagaaatttcactttgttcttct
cgggccccactaatccgtaacaacttctgtcaagaaacgagtggaactatggattcatat
acactgaagtccgtgttagatttgcctgcacattttcgttcagcttttaatttcagatac
tttaattcgctgcagagcgaatgctttcctgtttgtttccactccgatgcaaacatggtt
atttcagccccaactggaagtggtaaaacggtgctctttgagctttgcattttgaggctt
ctctcgaagttcatctctgaagaggggaggttcatccatttaaagggaaccctcaagaca
atctacatagccccatctaaggccttagtacaagagaagctccgtgattggaatgagaag
tttgggtcatgggggattaactgcctggagttgaccagcgataatgaattttacaacgta
aggaatatacaagaagctgatattattgtaaccactcctgagaaatttgatgctgtgact
cggtatcgcataaaagatggtggcttgagcttttttggtgacatagctcttctacttatt
gatgaagttcaccttttgaatgatccacgtggagcaactttggaggcaatagttagcaga
ataaaaatgcttgctcgcaaccctgagatgagatcaacttctctttctcatgtccgattc
attgcggtgtctgccacaattccaaatattgaggaccttgctgaatggcttatggttcct
gtccaaggaattaaaaggtttggagaagaaatgaggcctgtaaagttgacaactaaagtt
tttggctatacgccagccaaaaatgactttctatttgaaaagcgccttcaaaactatatt
tttgatattctcatgcaatattcgagaggaaaatctgctctggttttttgttcaacaaga
aaaggagcacaagaagcagcacagtgcctctctcagactgcaatgaactttggtcattca
aatccgttcattaaaagtaaagaacagcaggaaaggctaagggaagcatcactatcatgc
agtgacaaacaaatgcaatcttatatcatttatggtgttggttatcacaatggtgggctt
tgcctgaaggatcgtaatctcattgaaagtctttttcttatgggcgacattcaaattatt
tgcacaacaaatactcttgcccatgggatcaacctaccagcacatacagttgtaataaaa
tcaacacaacactacaacaaggaaaaaggtctttacatggaatatgacagatccactata
ctacagatgagcgggagggcaggccgcccaccatttgatgatacaggaatggtcataatc
atgacaagaagagaaactgtccatttgtatgagaatctattgaatggatgtgaaatggtg
gaatcacaattgctatcatgtgtgacggagcacttagctgcagagatagttcaactgacc
gtctcggatattacaagggcaattgagtggatgaagtgctcatatttgtatgtcagaatg
aaaaagaatcctggaaattatttagttagaaaagggacttcaagtgaccataaagagagg
gatatgcaagagatttgtgttcagaaagttaatgagttatcgcgacatcaaatgatctgg
actgatgaagatggttacctgttgaagccgctagagcctggaaagctgatgacaaagtac
tatttgaagtttgacacaatgaaacacattatgcagacccctgtaaattgcagtttggaa
gatgcacttcatatcatatgccgtgcagaggaaattgcttggatacagctcagacgcaat
gagaagaaacttctaaatgacataaacactgataaagatagccggcttcgctttcacatc
cttggtgataaagggaaaccgaaaaagcgtattcaaactagagaagaaaaaatatttgtt
ttggcaaatgaatgcttgactggtgatccttcagttcatgatttatccctgacccaggac
atgaattctatatgctcaaacgggtgtagaattgccaagtgtatgaaagagtatttcatt
tacatgaagaattatagaggagccttgaattcaacacttctagccaaatcattacatcaa
aaactctgggatgatagtccatacttgctgaaacaattacctggaattggaatggtgact
gcaaaggcactacattcaatgcaaatcaattcatttgagacgctagctgaagctgatcca
aggagaatagagatagtcacttgtcgaaaattcccatttgggaaccatattaaggattct
ctactttcactacctccaaaagtcgatgtgaagatggaggaaattgagtgccaaaggcaa
ggaaagtctaagctggtagtaacattgacaaggctatcacaaccggtgcaatcgacaaaa
cggcattatgctgatatgattgttggctcagaagaggataacttgattgtcttccatgag
aaaataagagtggaagagttctccagcccctacagtgcaacaattctcctgtcaagtcct
catcaaggaaagctaactatcaaggctgatcttatttttgaagaatacattggcattgat
ctccaccgaaaacttcttttgatgaaagagagcaacttgagcatgaaatataaacagaga
aataagcagccttcctcgtttcctccacctgaggaaatacatattatagatgacaatgaa
actacatctccagctccagccaaagagcttcacaattcagccaactctgaaaaggaaaat
ggtttcttgcccagtttcaaactcttagatgaagagatgggagaagatgagcctgatctt
gaagttgaagaagatgaatgcaaaatcatcactgaacaaacagtatttgaccacatacgt
gaaaaagccaagaactttcctgtcttggccacaccaagtattgcctgtttcccatcctca
gaggccttgattctcacaaggaagctctctcgtcagaagcagcttgaactccatagtgaa
gtagaagttctgggtgagacagacagaaacaagattacacgaccaagtgtggtcaatcca
tcttcagaacgcagtggacatggtgctaccaaatgtccgattcctccagaacctgaagag
agcacatccaagactttaactgggggatcaatatttgatcatatacagaaaaagtctaag
aattttccaatgatcaataaattgaagaccattgattcggagcctttattctggacgaag
gaacactcctctgagagtcgggctgagttaggcactgtttcctctgaaatattgaatgag
atgaattcagatgaaatcttggcagatactataaccatttcagattcggaacccagaaag
gtggaaagagattcatgtgtttcaaagcaaagcacaaaggtcagacacaatttattttct
ggaagctcccctggcacatatgggttactcaatcttcctccaagagtttcaagccccact
ggtgatctatcatctattgaaatgctatcttttgatatttccatgttaaagaacaatggc
cagtcggcagacccattgagcaacttgaaaagtagcaggaagcagcaatgccggtcgaga
gaatttaaaagacagaactgttctccaagtgtatccagaatacagtgctgctcgtcggaa
acagccagcgaaaccggggaagcagatgcatttcttgggttcaagagtgtcttttcattt
ctttga
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