Alnus glutinosa (common alder): 133860355
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Entry
133860355 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
aglu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133860355
03015 mRNA surveillance pathway
133860355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133860355
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133860355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
133860355
NCBI-ProteinID:
XP_062151963
LinkDB
All DBs
Position
2
Genome browser
AA seq
318 aa
AA seq
DB search
MGKPSRDRRSPSSGSSSSSLVDQTGSSSRSGVYTGSSSRSEVLTGSLSRSGAYTGSSSRS
EVLTGSSSRSPVVPGSDSRSSFRSPSISRSLSRSRSRSRTPLRRVRSQSPITPPLRKRKA
SPIQKSFVLRIDNLGCNVNEGQLKDNFGIFGEVVNVELPMDHSDNLPKGYGYVEFKAEED
AKMAKFYLHGNEINGNSIKVEFSFVSLPLKAITTLSKIDAPKTNNISDGEEDRLKRHREA
SPCRKPLASPRRGSPIQRDGSPRRLPDSPLRRRADSPAHRRVESPYRRDDTHPRRRSTSL
GRGPSPLMLNTSPSSLRS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggaagccaagccgagaccgtcggtctccatcttcgggttcatcgtcttcgtcccta
gtcgaccagacgggctcctcctcccgctccggggtctacacgggatcgtcttctcgttcc
gaagttctcactggctcgttgtctcgctccggtgcctacacgggatcatcttctcgttcc
gaagttctcactggctcgtcttctcggtcccccgtcgtaccgggctcagactcccgttcc
agctttcgctcaccctccatctctcggtccctctcgcgttccagatcccgctcgaggacg
ccgttgcggagagtccgttctcagagcccaatcacccctcctctcaggaagaggaaagcc
tctcctattcaaaagtcatttgttctacgtattgacaacctcggctgcaatgtgaatgaa
ggccaattaaaagataatttcggtatttttggtgaagttgttaatgtggagctgccaatg
gatcactctgacaatcttccaaaaggatatggatatgtggagttcaaggcagaagaagat
gctaaaatggcaaaattttacttgcatggtaacgaaattaatgggaattctattaaagta
gaattctcatttgtgtcgctacccctaaaagccattaccactttgtcgaaaatagacgct
cccaaaactaacaacatttctgatggtgaggaggatagactcaagcggcatagggaagct
tctccctgtcggaagcctcttgcctcaccaagaaggggatcccctatacaaagggatggt
tctcctagacgactgccagattctcctctacgtcgtcgtgcagattctccagcgcatcgt
cgagtagaatcaccttatcgacgtgatgatacacatcctaggaggaggtccacatctttg
ggcagaggtccatctccactgatgctcaatacatccccttcaagcctccgttcctga
DBGET
integrated database retrieval system
