Alnus glutinosa (common alder): 133860692
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Entry
133860692 CDS
T10577
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133860692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133860692
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133860692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
133860692
NCBI-ProteinID:
XP_062152253
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Position
2:1282247..1290188
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AA seq
478 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSSYGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
DRVVKEKHNIDGRMVEAKKAVPRDDQNILNRNSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLVKSFHELNGKMVEVKR
AVPKELSPGSSRSSPLGGYNYGLSRVNSFLNGYTQGYTPSTVGGYGLRMDGRLSPISGGR
SGYPPFGSGYGMSMNFEPGLNPGFGGSANFNSNLSYGRGVNPYYVGNSNRFGSPIGYDGR
SGGNSSFFSSVTRNLWGTGGLNYGTNSASSSAYQGSGSGSIVGSTFGNTGVNWDSSGISA
QGGNNVSNSSGNLGYGGGDNSYSLGMGGYGRNSGTNAAPTSSFAASNGGFDGAFADFHSG
GSVYGDTTWRSSNAEQDGSGPFGYGLGSAASDISAKTPPGYVGGYSVNKRQSNRGISA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgatagtggcaagttatttattggtggaatatcttgggacacaaatgaagag
cgtctcaaggaatattttagttcatatggggaggttgtagaagccgttattatgaaggat
cggaccacaggccgtgctcgaggttttggctttgttgtttttgctgacccggctgttgca
gacagagtcgtaaaggagaagcacaacattgatggaaggatggttgaggctaaaaaggct
gttcctcgggatgatcaaaatattttgaatagaaacagtggtagcatccatggctctcct
ggtcctggtcgcacaagaaagatatttgtcggaggtttggcttccacggtcacagagagt
gacttcaaaatgtattttgatcagtttgggacaataactgatgttgtggtgatgtatgat
cacaacacccagaggcctagaggctttggattcattacttatgattcagaggaagcagta
gacaaggttttggttaagagtttccatgaactaaatggtaaaatggttgaggtcaagcgt
gctgttcccaaagagttatccccaggttccagtcgcagcagccctcttggtggatacaac
tatggcctgagtagggtcaatagcttccttaatggctacactcaaggatatactccaagt
acagttggaggctatggactcaggatggatggtagattaagtccaatatctggtggtcga
agtgggtatcctccatttggttctggttatggaatgagtatgaattttgagcctgggttg
aacccaggttttggggggagtgcaaattttaatagtaatctcagctacgggcggggagtg
aacccttattatgttggtaattctaataggtttggtagtccaattgggtatgacggtcgt
agtggaggaaattcttcctttttcagctcagttactcgaaatctgtggggaactgggggg
cttaattatgggacaaactccgcaagttccagtgcataccagggatctggaagtgggagc
attgtaggaagtacatttggtaatactggagttaattgggattcttcaggaatttctgct
caaggtggaaacaatgtttctaacagtagtggaaatcttggttatggaggtggtgataac
agctatagtttgggaatgggagggtatggaagaaacagtggtaccaatgcagccccaacg
tcatcttttgctgcatcaaatggtggttttgatggggcctttgctgactttcatagtggc
ggctcagtctacggggacaccacttggcgatcatcaaatgctgagcaagatgggtctggt
ccctttggttatgggcttggcagtgcagcttctgatatttctgctaaaactcctcctggt
tatgttggtggttatagtgttaataagagacagtcaaacagaggaatttctgcgtag
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