Alnus glutinosa (common alder): 133860863
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Entry
133860863 CDS
T10577
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aglu03032
]
133860863
03029 Mitochondrial biogenesis [BR:
aglu03029
]
133860863
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133860863
DNA replication proteins [BR:
aglu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133860863
Mitochondrial biogenesis [BR:
aglu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
133860863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Pif1_2B_dom
AAA_22
DEAD
Mg_chelatase
ResIII
AAA_5
PhoH
AAA
Herpes_Helicase
TsaE
AAA_11
AAA_7
RNA_helicase
NPHP3_N
UvrD-helicase
AAA_14
AAA_16
Motif
Other DBs
NCBI-GeneID:
133860863
NCBI-ProteinID:
XP_062152479
LinkDB
All DBs
Position
2:complement(16698638..16700827)
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AA seq
514 aa
AA seq
DB search
MRFITAAIAAAYRRNFSTKRFQNRYQSKNKTKKSEHYRMKWTEEQKEIISAISGGKSVFF
SGSGGTGKTLLVKHIIKLLKKFHPPSRVFATAPTGVAAFAIRGQTLHSFAGIGHHMLDRH
ALLNRVLNDTKAYSRWKKVEALVIDEISMVDGELFESLESIAREIRDKDEVWGGIQLVVC
GDFFQLPPIPDPRNLSGKEFAFEADCWDASFNMQFELTKIFRQSDPRLVKLLQGIRRGEC
DPEELKLLEQSCSDESDPSVIQLYPLREDVNRVNEMRMKSLSGRTITYLSLDSGENPWKS
QLKKGIAPDELCLCEGARVMLIKNLSRWCGLLNGATGIVTEFGEFKGVDVRDICSQNLLP
IVKFDSGRTMVIEPETWVVMEGDTVVANRKQMPLLLAWALSIHKCQGMTLDKISTNLSKA
FGYGMVYVALSRVRSLDGLHLSGFTPSKIKAHPKVLLFYKSFSSEQAMEGKDDAANKIRG
CSRNVLLVSDTTSQAATKYHFSLSEFLTSRQKRK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttatcacggctgcaatagctgctgcgtacagaagaaactttagcaccaaaagg
tttcaaaatcggtaccagagtaaaaacaagaccaaaaagagtgaacactacagaatgaag
tggactgaggaacaaaaagaaattatatctgccatttccgggggaaaatccgtcttcttc
tcgggctcggggggcaccggaaaaacattgctggtgaagcatattattaaactattgaaa
aaatttcaccccccatctcgggtctttgccacggcacctactggggttgcggcatttgct
attaggggacaaacactgcactcgtttgcggggattgggcaccacatgctggatcgccac
gctttgctaaatagggttctcaatgacaccaaggcctacagcaggtggaaaaaagttgag
gcactggttattgatgagattagcatggttgatggggagttgtttgagagtcttgaatcc
attgcgagagagatacgggataaagatgaggtgtggggtggaattcagcttgttgtgtgt
ggagatttctttcagctaccaccaattcctgatcctcggaatttgtccggcaaagagttt
gcatttgaagctgattgttgggatgcgagtttcaatatgcaatttgagctcaccaagatt
tttagacaatcagatcctcgactagtcaagttgcttcagggtataaggagaggggagtgt
gatcctgaagagttaaaacttcttgagcaatcgtgctcggatgagtcagatccgtctgtg
atacagctctatccattgagagaagatgtgaacagagtgaatgaaatgaggatgaagagc
ttgtctgggaggactattacgtatttatctttggatagcggtgagaacccttggaagagt
cagctcaagaaggggatagcacctgacgaactttgcctctgtgaaggtgcaagggtgatg
ctgatcaagaacttgagtcgttggtgtggactgctgaacggtgccactggtatagttaca
gaatttggtgagtttaagggtgtggacgtgagagacatatgttctcaaaatcttctacca
atagtcaaatttgattcagggcggacaatggttatcgaaccagaaacgtgggttgtgatg
gagggagatacagttgttgccaacagaaaacagatgcccctgttattggcatgggctcta
agtattcacaagtgccagggcatgactcttgacaaaatttccactaatctgtctaaagct
tttggctatggaatggtctatgtagcactttcccgtgtgagaagcttggatggtcttcac
ttatcaggtttcactccctccaagataaaggctcacccaaaggttttgctcttctacaaa
agtttttctagtgaacaagctatggagggtaaggatgacgctgccaacaagatcaggggt
tgcagcagaaacgtactacttgtttctgacacaacgagccaagctgcaacaaagtaccat
ttctctctttctgaattcctaacttcacgccaaaaaagaaaatga
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