Alnus glutinosa (common alder): 133860923
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Entry
133860923 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
aglu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133860923
03015 mRNA surveillance pathway
133860923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133860923
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133860923
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RBD_AKAP-17A
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
133860923
NCBI-ProteinID:
XP_062152575
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All DBs
Position
2:20879304..20898243
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AA seq
277 aa
AA seq
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MAKPSRDRQSPSSRSLVERGSSSGSRVKTGSSSRSLHNTGSSSSLSKVYTGSDSRSSSSL
VPSIYSPLQKEKMKRKEERESSPNSFVLRINNLDSTVDEGQLKKIFSVFGKVVNVELPMD
HSNNLPKGYGYVEFKAEEDAKMAKLYLHGNKINENAIKVKFSFVSLPLKAITTLSKIDAP
KTNISDGEKDRLKRQREASPCRKPLASPRRGSPVQRDGSPRRPPDSPLRRRADSPVHRRV
KSPYQCDDTHPRRRSTSSGRGPSPLMRNRSPSRLMTC
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccaagccgagaccgtcagtctccgtcgtctcgctccctggtcgagaggggc
tcgtcctccggttcccgggtcaagacgggctcctcgtctcgctcccttcacaacacgggc
tcctcctcctctctctcgaaggtctacacgggctcagactcccgttccagctctagtctc
gttcccagtatttactcccctctacaaaaagaaaaaatgaaaaggaaagaagaaagggaa
tcctctccaaattcatttgttcttcgcattaacaacctcgacagcactgtggatgaaggc
cagttaaaaaaaatattcagtgtttttggtaaagttgttaatgtggagctcccaatggat
cactctaacaatcttccaaaaggatatggatatgtggagttcaaggcagaagaagatgct
aaaatggcaaaattatacttgcatggtaacaaaattaatgagaatgctattaaagtaaaa
ttctcatttgtgtcgctacccttaaaagccattaccactttgtcgaaaatagacgctccc
aaaactaacatttctgatggtgagaaggatagactcaagcggcagagggaagcttctccc
tgtcggaagcctcttgcctcaccaagaaggggatcccctgtacaaagggatggttctcct
agacgaccgccagattctcctctacgtcgtcgtgcagattctccagtgcatcgtcgagta
aaatctccttatcaatgtgatgatacacatccgaggaggaggtccacatcttcaggcaga
ggtccatctccactgatgcgcaacagatccccttcaaggttgatgacatgttaa
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