Alnus glutinosa (common alder): 133861252 Help Entry 133861252         CDS       T10577                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism aglu  Alnus glutinosa (common alder) Pathway aglu04120   Ubiquitin mediated proteolysis aglu04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:aglu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     133861252  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     133861252  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:aglu04121]     133861252 Enzymes [BR:aglu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      133861252 Ubiquitin system [BR:aglu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     133861252   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      133861252 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_DCAF4 WD40_RFWD3 zf-C3HC4_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_EML WD40_like zf-C3HC4 Beta-prop_CAF1B_HIR1 zf-RING_2 zf-C3HC4_3 Beta-prop_WDR75_1st zf-RING_UBOX Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N zf-C3HC4_4 Beta-prop_SCAP U-box Beta-prop_DCAF12 zf-RING_5 zf-rbx1 zf-RING_6 Beta-prop_IFT122_2nd DUF1664 RING_XB3-XBAT31 zf-Nse DUF6692 Motif Other DBs NCBI-GeneID:  133861252 NCBI-ProteinID:  XP_062152976 LinkDB All DBs Position 2:2320193..2329721 Genome browser AA seq 669 aa AA seqDB search MEEVSTGTGPVVPAVVKREAPPAVAHPAEESEGVLAELDKDLLCPICMQTMKDAFLTACG HSFCYMCIATHLRHKSDCPCCTHHLTLNHLFPNFLLDKLLKKASANQISRTASPVEQFSH ALQQGCEVSIKELDTLLSLLAEKKRKMEQEEAERNMQILLTFLNRLREQKVNELNEVQAD LQFIKEDITSVERHRMELYRARDRYSMKLRMLGDDSSARNSWPSSMDKNTSDLISSSLNT RRGLATWNLQNKQVNEKYGVISTRQQRKDALRGSDSQCINQSGLSVARKKRVHAQFSDLQ ECYLQKRRQLANKQHNQQEKDKSIIPREGYNEGLADFQSVLTTFTQYSRLRVVAELRHGD LFHSGNIVSSIEFDCDDELFATAGVSRCIKVFDFSMVVNESTDMHYPVVEMTTRSKLSCL SWNNFAKNHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDY KVKVWCTKQEASVLNIDMKANICCVKYNPGSSNYIAVGSADHQIHYYDLRNISQPVHVFS GHQKAVSYVKFLSNNELASASTDSTLRLWDVKENTPVRTFRGHTNEKNFVGLSVNSEYIA CGSESNEVFVYHKEISRPVTWHKFSSPNVNDSDDDVASYFISAVCWKSDSPTMLTANSQG TIKVLVLAA NT seq 2010 nt NT seq  +upstreamnt  +downstreamnt atggaggaagtgtcaacgggcacggggcccgtagtcccggcggtggtgaagcgggaggcg cccccagctgtggctcatccggctgaagaatcggagggtgtcttggcggagctggacaag gacttgctttgcccgatatgcatgcagaccatgaaggacgcgttcctgaccgcctgcgga cacagcttctgctacatgtgcatcgccacccacctccgccacaagagcgactgcccctgc tgcacccaccacctcaccctcaaccacctcttccccaacttcttgctcgataagctattg aagaaggcttctgctaatcaaatatcaagaactgcttctcctgtggaacaatttagtcac gcattgcaacagggttgtgaagtgtcgattaaggagctggataccctcttgtcactcctt gcagagaagaagaggaaaatggaacaagaagaagctgaaagaaatatgcaaatactgttg accttcttgaatcgtttaagggagcagaaagttaatgagctgaatgaggtacaagctgat ctccagtttattaaagaggatataacttctgtagagaggcatagaatggagttgtatcgg gcaagggataggtactctatgaaactgcgcatgcttggagatgattctagtgcaagaaat tcatggccttcatcaatggataagaacactagtgacctcatctccagttctctaaatacc cgcagagggttggctacatggaatctccaaaataagcaagtaaatgaaaagtatggagtc atatctaccaggcaacagagaaaggatgctttacgtggatcagactctcagtgcatcaat caatcgggtctatctgttgcaagaaaaaagcgggtccatgcccagttcagtgacctacaa gagtgttacctgcaaaaacgacgtcagttggcaaacaaacaacataaccagcaagaaaag gataaaagtatcatacccagagagggttataatgagggtcttgcagatttccaatcagtg ctgactaccttcacacaatacagtcgattgagggtcgtggccgaacttaggcatggggat ctattccactcaggcaatatagtatcaagcattgaatttgactgtgatgatgagttgttt gctactgctggagtatcccgatgcataaaggtctttgacttctccatggttgtgaatgaa tctactgatatgcactatcctgttgtcgagatgacgacgcgttcaaaacttagttgcttg agttggaacaactttgctaagaaccacattgctagtagtgattatgagggaattgtgacg gtttgggatgtaaatactcggcagagtgtgatggagtatgaagagcatgaaaaacgtgca tggagtgttgatttttcacgtacagagccttcaatgcttgtatctggtagcgatgattat aaggtcaaagtttggtgcacaaagcaggaagctagcgttcttaatattgacatgaaagca aatatatgctgtgtcaagtataatcctggatctagcaattacattgcggttggttcagca gatcatcagattcactattatgatttaagaaacatcagtcagccagtccatgttttcagt gggcaccagaaagccgtttcatatgtgaaattcttatcgaataatgagcttgcttctgct tcgacggacagcacattacggttatgggatgtgaaggaaaatacaccggttcgtaccttc agaggccacacaaatgagaaaaacttcgtgggcctttcagtaaatagcgaatacattgca tgcggcagcgagtcaaatgaagtttttgtctaccataaggagatctccaggcctgtgact tggcataaatttagttctccaaatgtaaatgactctgatgatgatgttgcgtcttacttc attagtgcggtatgctggaagagtgacagccctactatgctaactgctaatagtcagggc acgattaaggttctagttcttgcggcttga

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