Alnus glutinosa (common alder): 133861676
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Entry
133861676 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
aglu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133861676
03015 mRNA surveillance pathway
133861676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133861676
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133861676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
133861676
NCBI-ProteinID:
XP_062153445
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All DBs
Position
2:20951784..20963249
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AA seq
318 aa
AA seq
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MGKPSRDRRSPSSGSSSSSLVDQTGSSSRSGVYTGSSSRSEVLTGSSSRSGAYTGSSSRS
EVLTGSSSRSPVVPGSDSRSSFRSPSISRSLSRSRSRSRTPLRRVRSQSPITPPLRKRKA
SPIQKSFVLRIDNLGCNVNEGQLKDKFGIFGEVVNVELPMDHSDNLPKGYGYVEFKAEED
AKMAKFYLHGNEINGNAIKVEFSFVSLPLKAITTLSKIDAPKTNNISDGEEDRLKRHREA
SPCWKPLASPRRGSPIQRDGSPRRLPDSPLRRRADSPAHRRVESPYRRDDTHPRRRSTSL
GRGPSPLMLNTSPSSLRS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggaagccaagccgagaccgtcggtctccatcttcgggttcatcgtcttcgtcccta
gtcgaccagacgggctcctcctcccgctccggggtctacacgggatcgtcttctcgttcc
gaagttctcactggctcgtcgtctcgctccggtgcctacacgggatcatcttctcgttcc
gaagttctcactggctcgtcttctcggtcccccgtcgtaccgggctcagactcccgttcc
agctttcgctcaccctccatctctcggtccctctcgcgttccagatcccgctcgaggacg
ccgttgcggagagtccgttctcagagcccaatcacccctcctctcaggaagaggaaagcc
tctcctattcaaaagtcatttgttctacgtattgacaacctcggctgcaatgtgaatgaa
ggccaattaaaagataaattcggtatttttggtgaagttgttaatgtggagctgccaatg
gatcactctgacaatcttccaaaaggatatggatatgtggagttcaaggcagaagaagat
gctaaaatggcaaaattttacttgcatggtaacgaaattaatgggaatgctattaaagta
gaattctcatttgtgtcgctacccctaaaagccattaccactttgtcgaaaatagacgct
cccaaaactaacaacatttctgatggtgaggaggatagactcaagcggcatagggaagct
tctccctgttggaagcctcttgcctcaccaagaaggggatcccctatacaaagggatggt
tctcctagacgactgccagattctcctctacgtcgtcgtgcagattctccagcgcatcgt
cgagtagaatcaccttatcgacgtgatgatacacatccgaggaggaggtccacatctttg
ggcagaggtccatctccactgatgctcaatacatccccttcaagcctccgttcctga
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