Alnus glutinosa (common alder): 133861795
Help
Entry
133861795 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor RS40 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133861795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aglu03041
]
133861795
Spliceosome [BR:
aglu03041
]
Common components
Common spliceosomal components
SR proteins
133861795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
133861795
NCBI-ProteinID:
XP_062153587
LinkDB
All DBs
Position
2:complement(23183060..23188685)
Genome browser
AA seq
389 aa
AA seq
DB search
MRPIFCGNFEYDARPSDLERLFSRYGKVERVDMKSGFAFIYMEDERDAEDAIRRLDRTEF
GRKGRRLRVEWTKHERGIRRPGSSKKSSANTKPSKTLFVINFDTHHTRTRDLERHFDPYG
KIVSVRIRRNFAFVQYESQDDATRALDATNMSKLLDRVISVEYAVRDDDDERRNGYSPDN
RGRDRSLERGRDRRRSPSPFRRERGSPDYGRGSSPYRRERGSPDYGRGGSRSPPRRDRAS
PDYGRARSRSPYRRERVALDHRDGSSHSPYQTERVSADVGHGPSHSPYRKERASPDNARG
PSRSPYGRERASPDSGRAPSRSPYGRERASPENGRGPNRGPYGREKGSPDNDRELSPIPE
PREDSPNFGGGPETPVHERYRSRSPPAEE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccatcttctgtggaaattttgagtatgacgcacggccatctgatctggaacga
cttttcagtagatatgggaaggttgagagagtggatatgaagtctggattcgcttttatt
tatatggaggatgaacgagatgctgaggatgccattcggcgacttgatcgaacagaattt
ggtcgaaagggccgcaggcttcgtgttgaatggacaaaacatgaacgcggcattagaagg
cctggaagttccaaaaaatcttcagctaataccaaaccttcaaagaccttgtttgttatc
aattttgatacacatcatactaggacaagggacttggagaggcactttgatccatatggg
aagatagtgagtgtcaggattagaaggaactttgctttcgtgcagtatgaatcacaggat
gatgctactagagcattggatgcgacaaacatgagcaagttgttggatcgagttatttca
gtggagtatgcagttcgggatgatgatgatgaaaggagaaatggatatagccctgataat
agaggtcgtgataggtcattggagagaggccgtgatagaaggcgatccccaagccccttt
cgaagagagaggggtagccctgattatggccgcggttctagtccatataggagagagaga
ggcagccctgattatggccgtgggggcagtcgaagtccccctcgtagggacagggctagc
cctgattatggtcgtgcacgtagtcgtagtccttatcgaagagagagggttgcccttgac
catcgcgatggttctagccatagtccttaccaaacagaaagggtgagtgctgacgttggt
catggccccagtcatagtccttacagaaaagagagggcaagccctgacaatgctcgtggc
cctagccgcagtccttatggaagagagagggcaagccctgacagtggtcgggcccccagc
cgcagtccttatgggagagagagggctagtcctgaaaatggtcgtggccccaaccgtggt
ccttatggaagagagaagggtagtcccgacaatgatcgtgaactcagccccatacctgaa
cccagggaggacagccccaactttggtggtggtccagaaacccctgtgcatgagagatat
cgcagccgatcgcccccggcagaggaatga
DBGET
integrated database retrieval system
