Alnus glutinosa (common alder): 133861843
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Entry
133861843 CDS
T10577
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aglu03009
]
133861843
03036 Chromosome and associated proteins [BR:
aglu03036
]
133861843
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133861843
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
Pre-60S particles
Helicases
133861843
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
133861843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
DUF3474
CMS1
Motif
Other DBs
NCBI-GeneID:
133861843
NCBI-ProteinID:
XP_062153642
LinkDB
All DBs
Position
2:complement(24041525..24047594)
Genome browser
AA seq
694 aa
AA seq
DB search
MPSLVLSDPLLSETPKVKKEKKNKKMKNGNETLETCSPVSDKKKQKKESKKRKVLEIEDE
DQRSDTSSELVEPLNWKAEESEENEKNKKKMKKAMVDEEEEKSEEDPNAVSRFRISEQLR
AKLKEKGIESLFPIQAMTFNTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPAKASRK
TGYGRAPSVLVLLPTRELANQVHADFEVYGGALGLTCCCLYGGAPYPSQEARLKRGVDIV
VGTPGRVKDHIERGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVQDANKVQTLLFS
ATLPDWVKQIAARFLKPNKKTADLVGNEKMKASTNVRHIVLPCSSSARSQLIPDVIRCYS
SGGRTIIFTETKDSASTLAGLLPGARALHGDIQQAQREVTLAGFRSGKFMTLVATNVAAR
GLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSNISKIQRESGVKF
EHISAPQQADIAKAACAEAGEMITQVSDSVIPAFKSAAEELLKTSGLSAVELLAKALAKT
AGYTDIKKRSILTSMENFVTVLLEAGSPIYTPSFAFNVLRRFLPEEKVEAVKGLALTADG
KGAVFDVPAQELDTFLAGQENAANVTLEVLKTLPPLQEREPSRGGRFGSGGRGGFGDRSG
GRFSSGRGGRGGAFSGRRNDRFSNGGGRGRGKKW
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgctagttctctctgatcctcttctctctgaaacccccaaggtcaagaaggag
aagaagaacaagaagatgaagaacggaaacgaaaccctagaaacctgttctccggttagc
gataagaagaagcagaagaaggagagcaagaagcgaaaggtgttggagatcgaggacgag
gaccagaggagcgacaccagctcggagctggttgagccgctgaattggaaggccgaggag
tcggaggagaatgagaagaacaagaagaagatgaagaaggcgatggttgatgaggaggag
gagaagagtgaggaggatccgaatgcggtgtccaggtttcggatttccgagcagttgagg
gccaagttgaaggagaagggcatcgagtcgttgtttccgattcaggcaatgaccttcaat
accgttctcgacggctccgatttggtcggtcgtgcgcgaaccggtcagggtaaaacactg
gcctttgtgttgcccatcttggagtcacttacaaacgggccagcaaaagcatcaaggaaa
actgggtatgggagggcaccaagtgttttggtacttttacctactagggaattggccaat
caggtgcatgctgactttgaagtttatggtggagcgttgggtttgacatgttgttgttta
tatgggggagctccataccctagtcaagaggctagactcaaaagaggggttgatatagtt
gttggaacacctggtcgagttaaggatcacatagagagggggaatattgactttagctct
ttgaagttccgggtccttgatgaggctgatgaaatgttgagaatgggttttgttgaagat
gttgaactaattctaggaaaggtacaggatgcaaataaagttcagacactgcttttcagt
gccaccttgcctgactgggttaagcagattgctgctagatttcttaaaccaaacaagaaa
actgctgaccttgttggtaatgagaaaatgaaggctagtaccaatgttcggcatattgtc
cttccctgttctagctctgcaagatcccagcttattccagacgttatacgctgttatagc
agtggtggtcggacaattattttcactgaaacgaaggattctgcttcgacacttgctggg
ttgttgccaggagcacgggctttgcatggggatatacagcaggctcaacgtgaggtcaca
ctcgctggcttcaggtctggaaaattcatgacgttagtagcaacaaatgtggcggcacgg
ggtttggacatcaatgatgtgcaattaatcatccagtgtgaacctccacgtgatgtagag
gcctatatccatcgttctggtcgtacaggaagagcaggtaatactggagtggcggtaatg
ctttatgatccaagaaagtccaatatatctaaaatacaaagagaatctggtgtaaagttt
gagcacatatctgctcctcagcaagctgatattgccaaggctgcttgtgcggaagctgga
gagatgataacccaagtctctgatagtgtaattcctgctttcaagtctgccgccgaggag
ttgctgaaaacttctggtctatcagcagttgaattgcttgcaaaagctcttgccaagact
gctggttatactgatataaagaagagatcaattctcacttcgatggagaatttcgttact
gtacttcttgaggctggaagtccaatctatacaccatcttttgcttttaatgtgctgagg
agattcttgcctgaggagaaggttgaggcggtgaagggtcttgctctcacagccgatgga
aagggtgctgtctttgacgttcctgctcaagaattggatacatttcttgctggtcaggaa
aatgcagctaatgtgaccttagaggtgttgaaaacattgccgcccttgcaggaaagagag
ccgtcaagagggggtagatttggtagcggtggtcggggtggctttggtgatagaagtggg
ggtaggttttccagtggtagaggtggcaggggtggtgctttttctggcagaagaaatgat
aggttctctaacggtggtgggaggggtcgcggcaaaaaatggtga
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