Alnus glutinosa (common alder): 133862290
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Entry
133862290 CDS
T10577
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu00040
Pentose and glucuronate interconversions
aglu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133862290
Enzymes [BR:
aglu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
133862290
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
133862290
NCBI-ProteinID:
XP_062154043
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Position
3:33771999..33775783
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AA seq
331 aa
AA seq
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MASLPYADVDSSLRALAGRAEGFGRLSVGGLHGPVYCVSTLADDGPGSLREGCRRKEPLW
IVFEVSGVICLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECEHIIICNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCYFTRHDKTMLIGADPSHIG
DRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVEAQIYSECNIYEA
GHKKKTFEYYTEKAADLEEAKTGVVRSEGDSFLNGAQACSVTGVGEECVFHPSKFYPTWT
MEAPSDSLKNVLQICTGWQSICRPAEQTVIS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctgccgtacgctgacgtggattccagcctgagagcacttgcgggtcgggcc
gaggggtttgggaggttgtcggttggaggcctccacggaccggtctattgcgtctccact
ctcgcagatgatggtccaggatcccttcgtgaaggatgccgaagaaaagagccactctgg
attgtttttgaagtttcgggtgtgatttgtctttcttcttacttgagtgtatcgtcttat
aagacaattgatggccggggccaaaggataaagctcacgggaaagggcttaagactgaag
gaatgtgaacacataattatatgcaaccttgagtttgaaggtggtagagggcatgatgtt
gatggtattcaaataaagccaaattcaaggcacatatggattgaccggtgcagtcttcgt
gattatgatgatggacttatagatattaccagacaaagcactgatataactatttcaaga
tgttactttacgcgacatgacaagacaatgctcattggggcagacccctctcacattggc
gatagatgcattcgggtgacaattcatcattgtttttttgatgggacacggcaaaggcac
cctcgtgttagatttggaaaagttcatctatacaacaattacaccagaaactggggtata
tatgctgtttgtgccagtgtagaagcccagatatactctgaatgcaacatatatgaagca
ggacacaagaaaaagacttttgaatattatacagagaaggcagcagatctggaggaggca
aagactggcgtagtaagatcagagggagactcgtttctgaatggagctcaagcttgctca
gtaacaggggtcggggaagaatgtgtgttccatccaagtaaattttacccaacatggaca
atggaagcaccctcagattctcttaaaaatgttctccaaatttgtacaggttggcaatcc
atttgtaggcctgcggagcagacagtaatttcatag
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