Alnus glutinosa (common alder): 133862295
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Entry
133862295 CDS
T10577
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
133862295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133862295
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
133862295
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
133862295
NCBI-ProteinID:
XP_062154051
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All DBs
Position
3:30540376..30548629
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AA seq
693 aa
AA seq
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MARNKETLLLLLDVGPSMHDVLPEVEKVCSLLVEKKLIYHKFDEVGLILFGTEDTKNELT
REVGGYEHVVVLRDTKVVDGDLVETLQHLPRGTFNGDFLDAIIVGMDILIKRFGKTDKKR
KRLCLITNAICPIKDPFQGTKEDQIITIGEQMVQHGMGMESIVVRGRISENANKRVMDEN
DILLNIFSKTTCAKLVYVESPISLFGALRTRNISPVTIFRGDLEISSKMKIKVWVYKKTS
EEKFPTLKKYSDKAPATDKFATHEVKVDYEYKNVEGPSRVVPPEERIKGYRYGPQVVPIA
PSEWDAVKFKPEKSVKLLGFTDSSNIMRHYYMKDANVFIADPGNTRAVLAVSALARAMKE
KNKVALVRCVWRNGQGNVVVGVLTPNVSEKDNIPDSFYFNVLPFAEDVREFQFPSFNNLP
ASWQPNEQQQEAADNLVKMLDLAPPGKEEALQPEFIPNPLLERFYRLLELKSKQPDAAVP
PLDETLKKITEPDPELLSQNKSVIDAFRRIFELKEKPKLKKSNRRFLRENPSGSNKEEGY
GDISAQVLDSIGNTSAVKVEKIGDLTPVQDFDTMMSRRDGPEWVGKAIKDMKHKIFDLVE
DSHEGDNYPKAMECLVALRKGCILEQEPKHFNDFLHHLCNFCREKDLDSFCEFLASKELT
LISKTEAIDSEVSDDEARSFLVKLEPKTENLSG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaacaaggagaccttgctattgttgctcgatgtgggtccttcaatgcacgat
gttcttcctgaagttgaaaaagtctgctccttgctagtagagaaaaagctcatataccat
aaatttgatgaagtgggtcttattttatttggaactgaagacacgaaaaatgagctgacg
agggaagtgggtgggtatgaacatgtggtggttttacgagataccaaagttgttgatgga
gatcttgttgaaactttacaacacctccctcgaggaactttcaatggtgattttcttgat
gctataattgttgggatggatatattgataaagaggtttggaaaaacagacaaaaaaagg
aaacgcctttgccttataacaaatgcaatatgtcctattaaggacccatttcaaggaacc
aaagaagaccaaataatcaccatcggtgaacaaatggttcaacatggcatgggaatggaa
agtatagttgtgaggggaaggattagcgagaatgcaaataagagagtaatggatgaaaat
gatattctattgaatatattttcgaaaacaacatgtgcaaaattggtgtatgttgagagt
ccaatatcgttgtttggtgctctaagaactcgaaatatttctccagttacaatattcagg
ggtgatcttgaaatcagctccaaaatgaagattaaggtatgggtttacaagaaaacgtca
gaagagaagtttcctactttgaagaaatattctgacaaagcacctgcaactgataaattt
gccacccatgaggtcaaggtagattatgagtacaaaaatgttgaaggtcctagtagagtt
gtacctccagaagaaaggattaaaggatatcgttatggacctcaagtagttcctatagca
ccttctgaatgggatgctgtcaagttcaaaccagagaagagtgtaaaacttctaggattt
actgattcttcaaacataatgcgacactattacatgaaagatgccaatgttttcattgct
gacccgggcaatacaagggcagttcttgcagtttctgccttagcaagagcaatgaaggag
aaaaataaggtggctcttgtgcgttgtgtttggagaaatggacaggggaatgttgtcgtg
ggggttctgacacccaatgtatctgagaaagataatattcctgattcgttttactttaat
gtgcttcccttcgctgaggatgttcgagaatttcaattcccatctttcaacaatttacca
gcatcatggcagcctaatgaacagcagcaagaggctgcagataacttggtaaagatgctt
gacctggcaccacctggaaaagaggaagctctgcagcctgaatttataccaaatcctctt
ttggagcgtttctatcgtcttcttgagttgaaatcaaagcagccagatgcagctgtacct
ccacttgatgaaaccctcaagaagataactgaacctgatccagaactactttctcaaaac
aagtctgttattgatgcattccgcaggatttttgaactcaaagagaaaccaaagctgaag
aaatcaaatcggcgatttttgcgagaaaacccatctggatcgaacaaggaagagggttac
ggtgacatttctgctcaagttctcgattccattggaaacacatctgctgttaaggttgag
aaaattggggacttgacccctgtccaagattttgataccatgatgtcacgtagagatggt
ccagaatgggttggtaaagcaatcaaggacatgaaacacaaaatatttgacttggtggag
gactcccatgaaggggacaattatcctaaagcaatggaatgtctagttgcccttcgcaag
ggttgcatccttgagcaggaaccgaaacatttcaacgatttcctgcaccatctttgtaac
ttctgccgggagaaggaccttgatagtttctgtgaatttcttgcatccaaagaactcacc
ctgatctccaagacagaagccatagacagtgaagttagtgatgatgaagctagaagtttt
ttggttaaactagagccaaaaacggagaacttgagtggataa
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