Alnus glutinosa (common alder): 133862877
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Entry
133862877 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133862877
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aglu04121
]
133862877
Enzymes [BR:
aglu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133862877
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133862877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
PHD
zf-C3HC4
zf-RING_UBOX
PHD_5
zf-C3HC4_2
zf-RING_2
RNPP_C
TPR_MalT
zf-C3HC4_4
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
133862877
NCBI-ProteinID:
XP_062154770
LinkDB
All DBs
Position
3:complement(37857875..37875229)
Genome browser
AA seq
1688 aa
AA seq
DB search
MGRRKQRHPHHSGRVIVEIHDTREAGLQNQQAINTEQVQNNEFDIVDEEPYFVEVDRASW
VSDEHLDVSEIVLTDLTLREGFSGCEVSEDFFQDSKYTLRFKVCNVNEFLGRIKLGHWPV
LSSSDVSLELIKICTRDDTETHSVILSGSFDGPDEGISGLLHLGSLKFMTLRPVMGITSL
ENVSSLRVRVEILRSVFEACESLLENKRQQWKRSMMNVMAWLRPEVMTSEARYGVSISTE
MENDLLTEMGDGNLNTKKRARLDAAGFYEAIKPSKVDPMLADDIPDLLTELRPYQRRAAY
WMVQRENGDSRSLVGSGKSLFLSPLCLPVDFLDTCTKMFYNPFSGNVSLQPEQSSPYVFG
GILADEMGLGKTVELLACIFAHRKSASEDGIFINTESEVPCHQKSDLKRLKRERVECICG
AVNESRKYKGLWVQCDMCDAWQHADCVGYSPKGKHLKSSEVSGGQGCEKRSMADTKKHTR
KKNTANIVVREGEHICPLCSELMQATNSPVATGATLIVCPAPILSQWHAEIIRHTRPGSL
KTCIYEGAKITSLSDASIVDISELVSADIVLTTYDILKEDLSHDSDRHEGDRRFMRFQKR
FPVIPTLLTRIFWWRICLDEGQMVESNAAAATEMALRLYAKHRWCITGTPIQRKLDDLYG
LLRFLKASPFDVSRWWIEVIRDPYERRDAGAMEFTHKFFKQIMWRSSKRYLADELQLPPQ
DECVSWLTFSPIEEHFYQRQHETCVSYAREVIETLKDDFLKRKVKGCVSSDASFDPFITH
AEAGKLLNTLLKLRQACCHPQVGSSGLRSLQQSPMTMEEILMVLIGKTKIEGEEALRRMV
VALNGLAGIAIIENNFRQAVSLYKEALTLAEEHSEDFHLDPLLNIHIHHNLAEILPLASN
YSEQLYSEGQHFPESFEKKASKLHGIEECDQHVVKRRKVSGEDSMDFTIDAGNATGCTTV
ISENGLNGDQERDIEPHESSSYISEKYLRSVCENIKQKYLSVFSSKLSIAQQEFRKSNIL
VCHALRDRTNQHTVWWLEALHHTEQNKNFSSEFIKKIEEAISGTPNNSRSSRISSRFRSI
SSLKYHIQTGLDLLEASRIVLLDRLLEIDQTMEKPKEEDIERVRYCQNCNVNGDGPACVA
CELDGLFQDYEARLFRLNKEHGEMITSAEEALHFQKKKSALNHYDWSKPKLLSEKRDAGE
RVVVSRSPSELEIVLGVIKSYCKAQLGREGMLAAKKQLYILEGMRKEYGHARSLAIAQAQ
VLCAHDEIKMATTRLHIKENENDITVDALSQEELPSASVQYSDDKFISLALVSRIKGKLR
YLKGLALSKQRSPRESPNDSSLTQETGSLSTSSELKSGCVPKAHEETCPVCQEKLSNQKM
VFQCGHVTCCKCLFSMTEQRVHDNKFQAKWVMCPTCRQHTDFENIAYADDGQNETFSSSV
GHTNQGYAMSEASMFVQGSYGTKIEAVTRRILWIKHTDPKAKLLVFSSWNDVLDVLEHAF
TTNDITYIRMKGGRKSHVAISKFRGHENGAQGTRKTHAQQPASNFVQVLLILIQHGANGL
NLLEAKHVVLVEPLLNPAAEAQAISRVHRIGQENRTLVHRFMVKDTVEESLYKLNRSRDT
NSFISGNTKNQDQPVLTLKDVESLFATVATAVPENDENLTESLRHLPPSVAAGLAAERRL
KEHATCSS
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaggaagcaaagacatccccatcattcgggtagggtaatagtagaaatccat
gatacccgtgaagcagggctgcagaatcagcaagctatcaataccgagcaagtgcaaaat
aatgaatttgatatagttgatgaggagccgtatttcgtggaagttgatcgagcttcttgg
gtttcagatgagcaccttgatgtttcggaaattgttctaactgatttgactttgcgggaa
gggttttctgggtgtgaagtgagtgaggattttttccaggattcgaagtataccttaagg
tttaaggtgtgcaatgtaaatgagtttcttggtcgtattaaactaggtcattggcctgtg
ttatcctctagtgatgtatctttagaactcataaaaatatgcacaagagatgatacagag
acacactcggtgattttatcagggagttttgatggaccggatgagggtatttctggtctt
cttcacttgggaagtttgaagtttatgacgcttaggccagttatgggaattacatcatta
gagaacgtttcatctctcagagtgagggtggagattcttagaagtgtctttgaagcttgt
gagtcacttttggagaataagaggcaacaatggaaaaggagtatgatgaatgtcatggct
tggctgcgaccagaagtaatgacttcagaggctaggtatggcgttagtatatcaacagaa
atggaaaatgatctccttacggagatgggagatggtaatctcaacacaaaaaagcgtgca
aggcttgatgctgctgggttttatgaagccattaagccatccaaagtggatccaatgctt
gcagatgacatacctgacttgcttactgagctgagaccatatcagcgtcgtgcagcctac
tggatggtacaacgagagaatggagattcaagaagcttggtaggaagtgggaaaagtttg
tttttgtctcctttatgtttgcctgtggattttctcgacacatgtacaaaaatgttctat
aatccattcagtggaaatgtttctttgcagccggagcaatcttcgccatatgtctttggt
ggaattcttgctgatgagatgggtttggggaaaacagttgaactgcttgcttgcatcttt
gctcatcggaagtcagcatctgaagatggcatatttattaatactgaatctgaggttcct
tgtcaccagaaatctgatcttaagagattgaaaagggagcgtgttgagtgtatctgtgga
gctgtcaatgaaagtcgaaagtataaaggattatgggtacagtgtgacatgtgtgatgct
tggcaacatgcagattgtgttgggtattcacctaaaggaaaacatctaaaatcgagtgaa
gtttctggcggacaaggatgtgaaaagaggtcaatggctgatacaaaaaagcacacaaga
aagaaaaatacggccaacatagttgtgagagaaggggaacacatttgcccactatgctca
gaactgatgcaagcaactaactctcctgttgctactggtgccactcttatagtctgcccg
gctcccatattgtctcaatggcatgctgaaattatacgtcatacacgtccaggttcttta
aaaacttgtatctacgagggcgcgaaaatcacttctctttcagatgcatctatagtggat
atcagcgagcttgttagtgctgacatcgtattgaccacatatgatatacttaaagaagat
ctgtcacatgactctgataggcatgaaggtgatcgacgcttcatgagattccagaagagg
tttccagttattccaactcttcttaccagaatattttggtggaggatttgtttggatgag
ggtcaaatggtggagagtaatgctgctgctgccactgaaatggctcttcggttatatgct
aagcatcgttggtgcataacagggactcctatacaacgcaaactggacgacttatatgga
cttctacgatttcttaaagcaagtccttttgatgtttctaggtggtggattgaggttata
cgagatccatatgagaggagagatgcaggagctatggaatttacacataagttctttaaa
caaatcatgtggcgttcatcaaaaagatatttagcagatgagttgcagcttccccctcag
gatgagtgtgtctcttggctcactttctcaccaattgaagagcacttttaccaaaggcaa
catgaaacttgtgtgagttatgcccgtgaagttattgaaactttgaaagatgattttcta
aagaggaaagtcaaaggttgtgtatcttctgatgcttcttttgatcctttcataactcac
gcggaggctggaaaactgctgaacacactcttgaagcttcgccaggcctgctgccatcct
caagtgggaagctcagggctgcgttctttgcaacaatcccccatgactatggaggaaata
ttgatggttctcattggtaagacgaagatagaaggggaggaagctctcaggagaatggtt
gttgctttaaacgggcttgctgggatagctataatagagaataattttcgtcaagcagta
tcattgtacaaggaagcactgactttagctgaagagcactccgaagatttccatctggac
cctctattgaatattcacattcatcataatcttgctgagatactcccattggcttcaaac
tactcagaacaactctactcagagggacaacatttccctgaaagctttgaaaagaaggcc
tccaaattacatggcattgaagagtgtgatcaacatgttgtgaagaggcgaaaagtgagt
ggggaagactctatggatttcaccattgatgctgggaatgcaacaggttgtacaactgtc
atatcagaaaatggcttaaatggtgaccaagaacgtgatattgagccccatgaatcatcc
agttacatcagtgaaaaatatttaagatcagtgtgtgagaatataaagcagaagtactta
tctgtgttcagttcaaagctatccatagctcaacaagagttcagaaaatctaacattctg
gtttgtcatgcgcttagagacagaacaaatcaacatacagtttggtggttggaagccctg
catcatactgagcagaacaagaacttctcaagtgagtttatcaaaaagattgaagaagcc
atctcaggaactccaaacaattcaaggtcatcaagaatttcatcccgatttcggagcata
agttctctaaagtatcatatccagactggtttggatctattggaagcctctaggatagtg
ttacttgatcgactcctggaaattgatcaaacaatggagaaaccaaaagaggaggatatt
gaacgggtgagatactgtcaaaattgcaatgttaatggggatggccctgcatgtgttgca
tgtgaattggacggattatttcaggattatgaagccaggctctttcgccttaataaagaa
catggagagatgattacatctgctgaagaggccttacattttcagaagaaaaaatctgcg
ctcaatcattatgattggagcaaaccaaagctactcagcgagaagagagatgctggggaa
agagttgtggtctcaagatctccatctgagttggaaattgttcttggagttataaagagc
tattgcaaggctcagttagggagagagggtatgttggcagccaagaagcagctatacatt
cttgagggcatgcgaaaggagtatggccatgcacggtccttggcaatagctcaagctcaa
gttctatgtgcgcatgatgaaattaaaatggcaacaacacgattacacattaaagaaaat
gagaatgatataactgttgatgccttaagtcaagaggaattgccttcagctagtgtacaa
tactctgatgacaagttcatctctttggcgttggtgtcacgtataaaagggaaacttcgt
tatttgaagggtttggcactgtcaaaacaaagatcaccacgggaaagcccaaatgattcc
tcattaactcaagagacaggtagcttgtcaacttcttcggaactgaaaagtggatgtgta
cctaaagctcatgaggaaacatgcccagtttgtcaagaaaagttgagcaatcaaaaaatg
gtttttcaatgtggacacgttacatgctgtaaatgtttattttcaatgactgagcagagg
gtacatgataataagtttcaagccaaatgggtaatgtgcccaacatgtcgacaacataca
gattttgaaaatattgcttatgctgatgatggacaaaacgaaacttttagttcgtctgtg
gggcatacaaatcaaggttatgcaatgtctgaagcatctatgtttgttcagggttcatat
ggaacaaagattgaagcagtcacaagaagaatcttgtggatcaagcatacagatccaaaa
gccaaacttcttgttttctcaagttggaatgatgtccttgatgtattggaacacgccttc
acgactaatgacatcacttatatccgaatgaaaggaggcaggaaatcacatgttgccata
agcaaatttagaggacacgaaaacggtgcacagggaactcggaaaacacatgcccagcaa
ccagcatcaaattttgtccaggtgttattgatcctaatccaacatggagccaatggcctc
aatctcttagaagcaaagcatgttgttctagtggagccgctactcaatccagcagcagaa
gcacaagctatcagcagggtacaccgaattgggcaggaaaataggacactcgttcatcgt
tttatggttaaagacactgttgaagagagcctatacaaattgaatagaagcagggatacc
aattcattcatcagtgggaacacaaaaaatcaagatcagcctgttttgacgcttaaagat
gttgaatccctatttgcaacagttgcgacagctgtaccagaaaatgatgaaaatttaact
gaaagtctcagacatttgcctccttcggttgctgctggtttagcagctgagaggagactc
aaggagcatgcgacatgttcttcatga
DBGET
integrated database retrieval system
