Alnus glutinosa (common alder): 133862878
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Entry
133862878 CDS
T10577
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133862878
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133862878
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
133862878
NCBI-ProteinID:
XP_062154771
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Position
3:37851690..37855297
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AA seq
385 aa
AA seq
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MERELVELFEAAKKAADAAASADGGSEESRCLDALRQLKDFPVTYQVLVSSQVGKRLRHL
TKHPRKKIQSFASDLMEIWKDIVIKETNKNKKSENLDDKNSVKVESVNAQTAKAEKDQKT
SSIKVEKVSKAESIKVEKIYQNGMPSMEKVSRPDAVKTGRKVSSVDVVKVEKTHSAENVK
VEKITKEEKQASGVKKPLPGPGAPPKLTSMIKSNDATRDKVREILHEALSKVSGEAEEYI
QEEVSACDPIRVAVSVESVLFERWGSSLGAQKVKYRSLIFNLKDANNPDFRRRVLLGHVK
PERLINMSTAEMASDKRRHENQKIEEKALFDCERGAPPKETTDQFRCGRCGQRKCTYYQM
QTRSADEPMTTYVTCVNCNNHWKFC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagagagagctggtggaattgttcgaagcagcgaagaaagcggcggacgctgcggcc
tccgctgacggagggtccgaggaaagtcgatgcctcgatgccttacgccagctcaaggat
tttcctgtcacttatcaagttcttgtctccagccaggttgggaagcgtcttcgacatctg
acaaagcatcctaggaagaaaatccaatcgtttgcttctgacctgatggagatatggaag
gacattgttataaaggaaacaaacaaaaacaagaaaagtgaaaacttggatgataagaat
tctgtcaaagttgagtctgtaaatgcacagactgccaaggccgagaaggatcagaagaca
tcttccatcaaggttgagaaggtttcaaaggctgaaagcattaaggttgagaaaatttat
caaaatggtatgccaagcatggagaaagtttcaaggccagatgctgtcaagacagggaga
aaggtttcaagtgttgatgttgtcaaggttgagaaaactcattcagctgagaatgtcaag
gttgaaaagataaccaaagaggagaagcaagcttctggagtgaagaaaccattgccgggc
cctggtgctcccccaaagctgacatcaatgattaaatctaatgatgccacacgggacaaa
gtacgagaaattcttcatgaagctttgtctaaagtttctggtgaggctgaggagtatatt
caggaggaagtgagtgcatgcgaccctattcgagttgctgtttctgtagagtctgttctg
tttgagagatggggcagttctctaggggctcaaaaggttaagtatagatctttaatattt
aaccttaaggatgctaacaacccagattttcgaagaagggtacttcttggacatgtcaaa
ccagagaggcttatcaacatgagcacagcagaaatggcaagtgataagaggcgacatgag
aatcaaaagattgaagagaaagcattatttgactgtgagcgtggagcgccacccaaagag
acaactgatcaatttaggtgtggtcgatgtgggcagcgcaaatgcacctactaccaaatg
cagacgcggagtgctgatgagccaatgacaacgtacgtaacatgtgtaaactgcaataat
cattggaaattctgttag
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