Alnus glutinosa (common alder): 133862911
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Entry
133862911 CDS
T10577
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
aglu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
133862911
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
133862911
NCBI-ProteinID:
XP_062154811
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Position
3:complement(37244606..37252358)
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AA seq
1261 aa
AA seq
DB search
MMKRRHLHQSKHPFDAYPFEALLYGSWEAVELIRIMNGTMVMHFMDNQYIIEEKSPFSNL
RIRSRQATLSDCTCYLRPGIDICVLSASQHAKISDEENPEPVWLDARISSIERKPHEYQC
SCQIYVNFYVNQGPLGSETGTLSKEASIVGIDKISILQRLERVPCEDRHYRWAYSEDCSE
LPKTKLFLGKFVSELSWLLVASVFKQIAFDIRSVKNKIVYQILGADDDSCTLDSGNYLNA
VNFRVENDILLPTVVKFFPADAIEAGPACEMQEAGSPFYDPMDLRRSKRRNVQPERFLGC
DSVSEIDVGFVRTRPYKIEQWKDDEMLLPLACLFGPHASCSEEQNEVEQKTFSRSKNPCQ
DLIVCKRKGKSREVKSSVASQIENKTQLAIVPLPDESDPIVFERYRHLAKSRGNYEDDIT
EISSKYYYIDSAPKAQRNKISGLEDMDFEGGCEGKASEREVQRKRYRSVYTKRDNLSEER
TYQKRSLNVGAYKDMINSFLKNMDTTVKKEEPQIIDQWKKCKETNSLDQSTELEPPPDED
EGEISETEMLWKEMELAMTSSYLFEDDEGSNAGMSIGIMKKLSQSCQHEYKLDEEIGILC
CRCGYVSSEIRDVSAPFMQHTSWNTDEKQCNEKDSVHKPDEDEDLQVLCRQASADVPLSE
ENENVWALIPELRVKLHLHQKKAYEFLWRNIAGSLEPSLMKRTSKKTGGCVISHTPGAGK
TFLIISFLVSYLKLFPGKRPLVLAPKTTLYTWYKECIKWEIPVPVYLIHGRRTYRVFKQK
SPSFHKTVSFPGLPKPTDDVMHVLDCLEKVQKWHAHPSVLVMGYTSFLALMREDSKFAHR
RFMAKVLRESPGILVLDEGHNPRSTKSRLRKVLMKVKTDLRILLSGTLFQNNFCEYFNTL
CLARPMFINEVLKELDPKYKRQKKGTEKALYLREARARKFFLDKIAKRIDSNVGEERRQG
IKMLRKITSGFIDVYEGGSSDSLPGLQIYTLLMNSTDIQHEILVKLHKIMAECHGYPLEL
ELLITLGSIHPWLVKTTGCANKFFTMGELMELEKYKFDLKKGSKVRFVLNLVYRIFRKEK
VLIFCHNIAPVKLFLELFEKFFKWQRGNEVLVLTGDLELFERGRVMDKFEEPGGASRVLL
ASITACAEGISLTAASRVILLDSEWNPSKTKQAIARAFRPGQQRVVYVYQLLQTGTLEED
KYRRTTWKEWVSSMIFSEAFVEDPSRWQAEKIEDDVLREMVEEDRTKTFHMIMKNEKAST
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagaaggcatctgcatcaatccaaacatccatttgatgcttacccttttgaa
gctctattgtatggctcatgggaagcggtggagctcatcagaatcatgaatgggactatg
gtcatgcatttcatggataatcagtacataattgaggagaaaagtcccttctcaaacctt
cgtatacggtcaaggcaagctactttatctgactgcacctgctatctgagacccggcatt
gacatatgtgtgctttcagcatctcaacatgcaaaaatttcagatgaggaaaacccggag
cctgtgtggcttgatgctagaataagttctattgagaggaagcctcatgaatatcaatgc
tcatgccagatatatgttaacttctatgttaaccaaggccctctaggttcagagacagga
acacttagtaaagaagctagcatagtaggaattgataaaatttccatcctccaaaggctt
gagcgtgttccttgtgaagatcggcactatcgctgggcttactctgaggactgctctgag
ttgcccaaaactaaattgtttctggggaaattcgtatctgagctttcatggttgcttgtt
gcatcagtttttaagcagattgcttttgacataagatcagtgaaaaacaagattgtctat
cagattttgggagctgatgatgacagctgtacattagactctggtaattacttaaatgct
gtaaattttagagtagaaaatgatatcttactacccaccgtagtaaaattttttccggca
gatgccattgaggcaggtccagcttgtgaaatgcaagaagctggatcaccattttatgat
cccatggacttgcgacgttccaaacgtcgaaatgtacaacctgagcgctttcttggctgt
gatagtgtgtcagagatagatgttggctttgtccgaaccaggccatacaagatagaacaa
tggaaagatgacgaaatgttattaccactagcatgcctgttcggtccgcatgcaagctgt
tcagaagagcaaaatgaggttgaacaaaagaccttttcccggagtaaaaatccctgtcaa
gatctaatagtctgcaaacgtaagggtaaatcaagggaggtaaaatcgagtgtagctagt
caaatagaaaataaaactcaacttgctattgttcctctgccggatgaaagtgatccaata
gtctttgaacgctatcgccatcttgccaaaagtcgcggaaattatgaagatgatatcact
gaaatttcctccaagtattattacattgatagtgcccctaaagcacagagaaataaaatt
tctggcttggaagatatggattttgaaggtggatgcgaaggaaaagcttctgagagagaa
gtccaaagaaaaagatatcgctctgtatataccaaaagggataatcttagtgaagaaaga
acgtatcagaagagatccttgaatgtaggtgcgtacaaagatatgataaattcattcttg
aagaacatggatacaacagtcaagaaagaagagccgcagatcattgaccagtggaaaaaa
tgcaaggaaacaaatagcttggaccaaagcacggagttggaaccacccccagatgaggat
gagggagagatctcagagactgaaatgttgtggaaagaaatggaactagccatgacatca
agttatctttttgaagacgatgagggctcaaacgctggaatgtccattgggatcatgaaa
aaattaagtcaaagttgccagcatgaatacaaattggatgaagaaattggaattctgtgc
tgtagatgtggctatgtgagctctgagataagagatgtttcagcaccctttatgcaacac
acaagctggaacacagatgagaagcaatgcaatgaaaaagattcagtgcataagccggat
gaagatgaggatttgcaagttctctgtcgtcaagcctctgctgatgtgccattatcagaa
gaaaatgagaacgtgtgggccttaatccctgaacttcgagtgaaattacacctccaccaa
aaaaaagcttatgaatttctttggcgaaatattgctgggtctttagaaccgtcacttatg
aaacgaacatccaagaaaacaggtggttgtgttatttctcatactcctggagctgggaaa
acgtttctcattatttcattccttgttagctatttgaaattgttccctggaaaacgaccc
ttggttcttgctccaaagactacgctatatacctggtacaaggaatgtatcaagtgggaa
attcctgttccagtttatctaattcatggtcgtagaacctacagagtcttcaagcagaaa
tcgccatcctttcacaaaactgtgtcctttccaggacttccaaagcccactgatgatgtc
atgcatgttttggattgcctagagaaagtacagaagtggcatgcacacccaagtgttctt
gtcatgggttatacctcatttctagcattaatgcgagaagactcaaagtttgcacacaga
aggtttatggctaaagtgttgcgggaaagtccagggatattggtactagatgaaggccac
aatcccagaagtacaaaatcaaggttgaggaaggttttgatgaaagttaaaacagacctg
agaatattgctttcaggtacattgtttcagaacaatttctgtgaatattttaataccctc
tgcttggcaagacccatgtttataaatgaagttttgaaggaattagacccaaaatacaag
aggcagaagaaaggcacagaaaaagcactctatttgagagaagcccgagcaagaaagttc
tttttagataagattgctaaaagaattgattcaaacgtaggagaagagaggaggcagggt
ataaagatgttgagaaaaatcacaagtggatttatagatgtgtatgaaggtggaagtagt
gacagccttcctggtttacagatttacaccttattaatgaattcaactgacatacagcat
gaaattttggttaaacttcacaagataatggctgaatgccatggatatccgctggagttg
gagcttttgataacccttggatcaatacatccttggttagtgaaaactacaggctgtgct
aacaagtttttcaccatgggggaactaatggagcttgaaaagtataagtttgatctgaag
aaagggtcaaaggtaagatttgttttgaaccttgtgtatcgcattttcaggaaggagaag
gtactgatcttctgccacaacattgctcctgttaaactgtttttggagttatttgagaaa
ttcttcaagtggcagaggggtaatgaagtgttggtccttactggggatttagagttattt
gaacgtggaagagtgatggataaatttgaggaaccagggggggcctcaagggtactactt
gcttcaatcacagcttgtgctgaagggatcagtttgacagcagcttctcgggtgatatta
ctggattctgaatggaacccttccaagacaaaacaggctatagctcgggctttccggcct
ggtcagcagagggtggtttatgtttatcagctcttgcaaacgggcacgctggaagaagac
aagtatcgaaggacgacatggaaggagtgggtctcaagtatgatttttagcgaggcattt
gtggaggatccttctcgctggcaagctgaaaagattgaagatgatgttttgagggaaatg
gtggaggaggaccgaactaaaacattccatatgatcatgaagaatgaaaaggcttcaaca
agttga
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