Alnus glutinosa (common alder): 133862950
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Entry
133862950 CDS
T10577
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133862950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133862950
03036 Chromosome and associated proteins [BR:
aglu03036
]
133862950
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133862950
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133862950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
133862950
NCBI-ProteinID:
XP_062154861
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Position
3:28486453..28494097
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AA seq
1039 aa
AA seq
DB search
MDFDVGTSLEVVSQYKKRRIPHKTDFQSCKVLRGIEVILPNLRSADYYMKPCLKELAARE
LVDPGYCSRVLDFTIGRVGYGSVKYLGETDIRQLDLDDIVKFHRHEVVVYEDENAKPVVG
QGLNKAAEVTLVLRVRSLGFEEGKLEMIGDTLRMSAERQGAHFISFDPANGEWKFLVQHF
SRFGLSEDDEEDIVIDDATVAQNPVGVNGGEISDIDEEEHVGPNGVLLSHSLPAHLGLDP
VRMREMKMLMFPDEEEEAEDFKEILTCQKPSFGKEYIRPLHNSTQRMSHRSSPPVARKTP
LALLEYNHGSFDSNSPGAILMAPQNKGMLLKPIKPEGSGFKLDLKQETPVTGSHSRNIVD
AGLFMGRSFRVGWGPNGILVHTGTPVGSNNSQRVLSSVINLEKVAIDRVVRDENNKVREE
LIEFAFDSPLNFHNEINHETKEVEVGSFKLRLLKLVSDRLMLSEICRRYGDMLERRLEVP
GLTSSTRVVLSHQVMVWELIKVLFSNRENSLKLKSLGADNEEDMMQDMKEASSEVDLEAL
PLIRRAEYSLWLQETVCPRVQDTISSLNESNYLEHVFLLLTGRQLDAAVELAASKGDVRL
ACLLSQAGGSMVNRADVLRQLDLWRINKLDFSFIEKDRLRLYELLSGNIHGALHDVNIDW
KRFLGLLMWYQLPPDTSLPVVFHAYQHLLVDGKAPYPVPVYIDEGPVEEVVKWGTEERFD
FSYYLMLLHASEEGDFGYLKTMFTALSSTNDPLDYHMIWHQRAVLEAIGAITSNDLHVLD
MGLVSQLLCLGKCHWAIYVILHMPYCEDFPYLHVNLIREILFQYCELWSSEESQTQFIEN
LGVPAAWLHEAMAVYFSYYGDFSKALEHFLQCAHWQKAHTIFITSVAHKLFLAAKHSEIW
RLATSMEDQKSEIENWDLGAGIYISFYLLRSSLQEDNNTMSELDSFVSKNAACREFLGRL
HESLTVLSGRLQVDARVAYSKMAEEICGLLLSDIEGSTCDGQLSCFDTVSSAPIPEDLRS
SYLQGAVSVFTCFLSEVAT
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggactttgatgtgggaactagtttagaagttgtatctcagtacaagaaaagaaggatc
cctcataagactgattttcagtcatgtaaggttttgagagggattgaagttatcttgcct
aatttaagatcggctgattattatatgaaaccctgtttgaaggagttggctgcccgggag
cttgtagaccctggttattgtagccgagttttggatttcacgattgggagggttggttat
ggatcagtcaaatatcttggggagactgacattagacagttagatttagatgacattgtg
aagttccataggcatgaggtagttgtgtatgaagatgaaaatgccaagccggtggttggg
cagggacttaacaaggctgctgaggtgactttggtccttcgagtaagatcactcggtttt
gaagaggggaaactggagatgattggggacacattaagaatgagtgcagagagacaaggg
gctcacttcatttctttcgacccagcaaatggtgaatggaaattcttggttcaacatttc
agcagatttggattgagtgaagatgatgaagaagatattgtgatagatgatgcaactgta
gctcagaatcctgtgggggtgaatggcggtgagatttctgatattgatgaagaagaacac
gtgggccccaatggtgttttgctctctcattctcttccagcacatcttgggcttgaccct
gtaagaatgagagaaatgaaaatgttgatgtttcctgacgaggaagaggaggcagaagat
tttaaggaaatactgacatgtcagaagccatcttttggtaaagaatacataagaccttta
cataactctactcagaggatgagccatcgatctagtccaccagttgctcgaaaaacccca
ttagcattgcttgagtacaaccatggtagttttgactcaaactctcccggagctattctg
atggccccacaaaataagggtatgttgctgaagccaataaaacctgaaggttcaggtttt
aaactggacctcaagcaagaaacaccagtaactggaagccattctcgcaacatagtggat
gcaggtttgttcatgggtaggtcatttcgagtagggtggggcccaaatgggatccttgtt
cacactggtacgccagtaggtagtaacaattctcaaagagtgttatcgtctgttatcaat
ttagagaaggttgctattgatagagttgttagagatgaaaataacaaagtcagagaggaa
cttattgagtttgcttttgattctcctttaaatttccacaatgagataaatcatgaaaca
aaagaagttgaagttggttccttcaaactgaggcttctaaaacttgtctcagatcgctta
atgctttcagagatttgtaggagatatggagatatgctggagaggaggttggaagttccc
gggctaacttcctctactcgtgtggttttgtctcatcaagtaatggtctgggaattgata
aaagttcttttttccaatcgggaaaatagtttgaagttgaagtccttgggtgctgataac
gaggaagacatgatgcaggatatgaaggaagcttcttctgaagttgacctagaagcacta
cctcttattcgaagggcagagtacagcttatggttgcaagagactgtttgccctcgtgta
caagatacaataagctccttgaatgagtccaattacctagaacatgtattcttactcttg
actgggcggcagcttgatgcagctgtggagctggctgcttctaaaggagatgtgagactg
gcttgtttattaagtcaggctggtggttccatggttaatcgtgctgatgttttgcggcag
cttgatctttggagaatcaataagctggatttcagtttcattgagaaggaccggttaaga
ctttatgaattgctttctggtaatattcatggtgctttgcatgatgtgaatattgattgg
aagaggtttctagggttattgatgtggtatcaactaccacctgacacttcattgcctgtt
gttttccatgcttatcaacatcttcttgttgacggaaaggctccatatcctgttccagtg
tatattgatgaaggaccagtggaagaggttgttaaatggggtacagaggaacgttttgac
ttctcatattatcttatgcttcttcatgccagtgaagagggcgattttggctatttgaag
acaatgttcactgccttatcttcaacaaatgatccacttgattaccatatgatctggcat
cagcgtgcagtattggaagcaattggtgctataacttctaatgatcttcatgttcttgac
atgggacttgtctcgcagctgttgtgtctggggaaatgtcattgggccatctatgtgatc
cttcatatgccctactgtgaagattttccatatctgcatgtgaatctcattcgggaaata
ttgttccagtactgtgaattgtggagttcagaagaatcacaaacccagtttattgagaac
ttgggtgtcccagctgcgtggcttcatgaggctatggcagtttactttagttactatggg
gatttctcaaaggcacttgaacactttcttcaatgtgcacattggcaaaaagctcatact
attttcataacatcggttgctcataaattgttcttggcagccaaacactcggagatatgg
aggcttgctacttctatggaggaccaaaagtcagaaattgaaaattgggacctgggagct
ggaatttatatttcattctatctattgagaagttcattgcaggaagataacaatactatg
agtgaactggattcttttgtgagcaaaaatgctgcttgtagagagtttcttggccggtta
catgagtctttgacagttttgagtggcagattacaagttgatgcaagagtagcttattca
aaaatggcggaggagatatgcggtttgcttctttctgacattgaaggctcaacatgtgat
ggtcagctaagctgctttgacactgtttctagtgctcctattcctgaagaccttcgctca
agttatttgcagggtgcagtgtctgtttttacgtgctttctttcagaggtggctacatag
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