KEGG   Alnus glutinosa (common alder): 133863009
Entry
133863009         CDS       T10577                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133863009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aglu03041]
    133863009
Spliceosome [BR:aglu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133863009
 Complex B
    133863009
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C RRM_7 DUF8489 RRM_occluded
Other DBs
NCBI-GeneID: 133863009
NCBI-ProteinID: XP_062154957
LinkDB
Position
3:complement(1476536..1483017)
AA seq 582 aa
MSDYEGRYEGNGEDAENYGGGSSPQPRGSSHGGPEDLGDSKSQHGSRDYERESSKSREKD
REKGRDKERDRDRDRDRDRGNDREKSKDRDRDRERDRGSDRDRHHRDRPRDRDRGERRER
VRDRDDDDFYRSRDYDRRRDYDRDREDRSRRRSRSRSGGKSEHRSKSRSRSRSKSKRISG
FDMAPPASALLPGAAVAAGQIPGTSPTLPGMFPNMFPLATGQQFGALPVMPVQAMTQQVL
IVATRHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFV
EMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGS
AGGLEGPDRIFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLS
VTDIACAALNGIKMGDKTLTVRRANQGASQPKPEQENVLLHAQQQIALQKLMLQPAAVAT
KVVCLTQVVSPDELKDDDDYQDILEDMREECGKFGALVNLVIPRPQPNGEQLPGVGKVFL
EYEDIDGSAKARSGLNGRKFGGNQVVAVFYPENKFAQGDYEG
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgtctgattacgagggaagatacgaaggaaacggagaggacgctgaaaactatggaggt
ggctcctcccctcaacctcgtggtagtagccatggtggtcccgaagatctcggcgactcc
aagtctcagcacggttctcgtgattatgaaagagaatcttcaaaaagtagggagaaggat
agagaaaaagggcgtgataaggagagggacagggacagagatcgggatagggacagaggc
aatgatagggagaagagcaaggacagggacagagatagggaaagggacagaggcagtgac
cgggaccgtcatcatagagatcgccccagggaccgggatcgtggtgaaagaagggaaagg
gtcagggatagggatgatgatgatttttatcgaagccgggactatgacagacgaagggat
tatgatagagacagagaggataggtccaggcgcaggtctcgctctcgttcagggggtaaa
tctgagcacagatcaaagtcacgatctcgttctcgctctaagagcaaaaggattagtggt
tttgatatggcgcctcccgcatctgcattgttacctggtgctgctgttgctgcaggtcag
attcctgggaccagtcctacccttcctgggatgtttccaaacatgtttcctttagcaact
ggtcaacagtttggagctcttcctgttatgccagtacaggcaatgactcaacaggtactc
attgtagctacgaggcatgctcggcgggtgtatgtcggtgggcttcctcctacagcaaat
gaacagtctgttgcaacatttttcagtcatgttatggctgcaattggaggaaacactgct
ggtcctggtgatgctgttgtcaatgtgtacataaaccacgaaaagaagtttgcttttgtg
gagatgagatctgttgaggaggctagtaatgcaatggctttagatggaattatttttgag
ggtgctcctgttaaggtgaggagacctagtgactacaacccatctcttgccgcaacgctt
ggtccaagtcaacccaatcccaatctgaacctggctgctgttggtctaacaccaggatcc
gcaggtggtcttgagggtcctgaccgcatttttgtgggtgggcttccctattacttcaca
gaaacacagattagggagttgttagagacttttgggccacttcggggttttgatcttgtg
aaagacagagaaaccggaaattcaaaaggctatgcattttgtgtttaccaagatctttca
gttacagacatagcttgtgcagctctgaatggaattaagatgggtgataaaactctcact
gttagacgtgctaaccagggtgctagccaacctaaacctgagcaagagaatgtattattg
catgcacagcagcagattgcattgcagaagctcatgttacaacctgctgcagtggccaca
aaggttgtatgtctaacccaggtggtttctcctgatgaactcaaagatgatgatgattat
caagatattttggaagacatgagagaagaatgcggaaaatttggtgcactggtaaacctc
gtcatcccacgcccgcaaccaaatggtgaacaattacctggagttgggaaggtttttttg
gagtatgaagacattgatggttctgcaaaagcacgttctgggttgaatggaagaaaattt
ggtgggaatcaagtcgtggccgtcttttatcctgagaacaagtttgctcagggggactac
gaaggctag

DBGET integrated database retrieval system