Alnus glutinosa (common alder): 133863025
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Entry
133863025 CDS
T10577
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133863025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133863025
03110 Chaperones and folding catalysts [BR:
aglu03110
]
133863025
03029 Mitochondrial biogenesis [BR:
aglu03029
]
133863025
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aglu04147
]
133863025
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133863025
Messenger RNA biogenesis [BR:
aglu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133863025
Chaperones and folding catalysts [BR:
aglu03110
]
Heat shock proteins
HSP60 / Chaperonin
133863025
Mitochondrial biogenesis [BR:
aglu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133863025
Exosome [BR:
aglu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133863025
Exosomal proteins of other body fluids (saliva and urine)
133863025
Exosomal proteins of breast cancer cells
133863025
Exosomal proteins of colorectal cancer cells
133863025
Exosomal proteins of bladder cancer cells
133863025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
133863025
NCBI-ProteinID:
XP_062154976
LinkDB
All DBs
Position
3:12577290..12591577
Genome browser
AA seq
575 aa
AA seq
DB search
MYRIASKLASTIASSSSRRLVCNRVICSRNYGAKDIGFGIGARAAMLQGVSEVADAVKVT
MGPKGRNVIIEKTHGDPQVTKDGVTVAKSISFKEKAKNVGADLVKQVASATNTAAGDGTT
CATVLTQAILTEGCKSIAAGVNVMDLRRGINMAVDAVISDLKSKASMLSTPEEIKQVATI
SANGEHEIGDLIARAMEKVGKEGVITVADGNTLDNELEVVEGMKLARGYISPYFVTDQKT
QKCELENPLILICDKKISDVNSLLRILELSVQKKRALLVVAEDVDSEALSLLILNKHHAA
VKVCAIKAPGFGENRRANLDDLAIRTGGEIITEDRGLTLDKVQFEMLGTAKKVTVSLDDT
IVLHGGGDKKLIEERCEQLRTAMEKSTAMFDKEKAQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGILPGGGVALLYAAKVLENLPTENEDQKRGIKIIQNALKAP
ASTIASNAGFDGAVVIGKLLEQDNHNWGFDAAKGVYVDMVKEGIIDPLKVIRTALVDAAS
ISLLLTTTEAAVVDHLDEKNKRPSRMPNLDDMGGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaatagcttcgaaattagcttcaacgatcgcttcctcttcttcaagaagactt
gtgtgtaacagagtcatatgcagtagaaattatggggccaaagatatcggatttgggatt
ggggcccgggcagcaatgctgcagggcgtttccgaggtagcagatgctgtaaaagtcaca
atggggccaaagggtcgcaatgtgataattgagaaaactcatggagacccccaagtcaca
aaggatggtgtcactgttgccaaaagtatcagcttcaaggaaaaggccaaaaatgttggt
gcagatcttgtaaagcaggttgcaagtgctactaatactgctgctggagatggtactact
tgtgctactgtcttaactcaggcaatactcacggaaggttgcaagtcaatagctgccggt
gtgaatgtgatggatttgcggcgtggtatcaatatggcagttgatgctgttatatctgat
ctgaaaagcaaagcatccatgttaagcacaccagaagaaattaaacaggttgcaactatt
tctgcaaatggtgaacatgaaattggagatttgatagcaagagcaatggagaaagttgga
aaggaaggagtcattactgtcgctgatgggaatactttggataatgagcttgaagtggtg
gaaggaatgaagctagccagaggttacatatctccttattttgttactgatcagaagacc
cagaaatgtgagctagagaacccgttgatccttatttgtgacaagaaaatttcagatgtg
aattcccttctgagaatattggagctatcagtacagaaaaaaagagcacttcttgttgtg
gctgaggatgttgatagtgaagcactctctttgcttatactcaacaagcatcatgctgcg
gttaaggtttgtgccattaaagctcctggttttggggaaaatagaagagcaaatttagac
gatcttgccattcgtactgggggagagattatcactgaagaccgtggtttaaccctggac
aaagtccaatttgaaatgcttggaactgcaaaaaaggtgactgtttctcttgatgacaca
atagttctacatgggggtggagataagaagctgatcgaagaaagatgtgagcagctgagg
acagctatggagaagagtactgccatgtttgacaaggagaaagcacaggaacggctatca
aagctatctggtggtgtcgctgttttcaaggttggaggggctagtgaggctgaagttggg
gaaaggaaggatagggtcacagatgctttaaatgctacaagagcagctgtggaagaaggt
attttgccaggtggtggtgttgcccttttgtatgctgcaaaagttttggagaatcttcca
actgaaaatgaagaccagaaaagaggcataaagataatccagaatgctctcaaggcacct
gcgtccacaatagcctcaaatgctggttttgatggtgcagtggtcattggaaaattgttg
gaacaagataatcataattggggtttcgatgctgctaaaggtgtatatgttgacatggtg
aaggaaggaatcatagatcctctcaaagtgattagaacggctttggtagatgctgccagt
atctcgttgctactgacaacaactgaggcagctgtagtggatcatttggatgagaaaaac
aaacgtcccagccgcatgccaaatttggatgatatgggcggcttctag
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