Alnus glutinosa (common alder): 133863060
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Entry
133863060 CDS
T10577
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aglu03016
]
133863060
Transfer RNA biogenesis [BR:
aglu03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
133863060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
ANAPC4_WD40
DUF2982
Motif
Other DBs
NCBI-GeneID:
133863060
NCBI-ProteinID:
XP_062155022
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Position
3:complement(34469388..34475294)
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AA seq
1319 aa
AA seq
DB search
MNNLKLYSELSSKLELSSKEEEQEEIVLLSAFDIERSRLFFASSANRIYTTHLSSFQNER
AWSKTSLPAEVDSVDLEPSDYMTALEYLMEKEALIIGTWSGLMLLHSVDGNGTQVVGRVE
GGIRCIAPSPDGDLLAVINRFGQVLVMTHDWDLLYETELEAALEDFDFSGQPTMSSRCES
SVSWRGDGKYFAKLSKVCDSTTLLKEIKVWERDTGELHATSESKEFMGSVLEWMPSGAKI
AAVYDGKADDECPSIAFFERNGLERSSFRINEQKDATIEIMRWNCTSDLLAAVVRCEKHD
AVKIWFFSNNHWYLKHEIRYSKQDGVRFMWDPTKPLQLICWTLGGHITIDNFIWNAAVME
NSMALVIDDSKILVTPLSLYLMPPPMYLFNLKFPSAVRDISFYSKNSKNCLAAFLSDGCL
CAVELPSPDTWEELEGKQFIVEASVSESVFGPLVHLIWLDSHILLTVSHYGFNHYVSRTS
SNEDGLLGFYSQEIELVCSENHVPGLPTCSGWHAKVLRQNSLDGLVVGIASNPTKSCSAF
IQFDGGKLSEYTTRIGTLKHVDMSFSSSCPWMSVVSVGDSGSFKPLPFGLDDLGRLHVGG
RILCNNCSSFSVYSNLADQVITHLILATKQDLLCIVGIGDILHGELDMKYEDFIPTGNRR
REENKNFIHIWERGAKVVGVLHGDEAAVILQTTRGNLECIYPRKLVLASIVNALVEGRFK
DALLMVRRHRIDFNVIVDRCGWEVFLQSAAEFVRQVYNFSYITEFVCAIKNENITERLYK
DFITLPCSKDTKDVQARDSKGLCANNKVSSVLLAIRKALEEQLPESPARELCILTTLARS
DPPAIEEALERIKVTREMELSSSNDPRRMSYPSAEEALKHLLWLSDAEVVFEAALGLYDL
NLAAIVALNSQRDPKEFLPFLQELEHMPVVLMRYNIDLRLHRFAKALKHIVSAGDAHFED
SMNLMKNNPQLFPLGLQLITDPAKRKQVLEAWGDHLSDEKCFEDAATIYLCCSSLEKALK
SYRACGNWSGVLTVAGLLKMGKDEIIQLSRELSEELQALGKPGQAAKIALEYCGDVNGGV
NLLISARDWEEALRVAFLHRREDLISEVKNASLECASMVIGEYEEGLEKVGKYLARYLAV
RQRRLLLAAKVQSEERSMSDLDDDTASEASSNFSGMSAYTTGTRKSTTSSIISSATSKAR
DMRRQRKRGKIRPGSPGEELALVEHLKGMSLTAGARRELKSLLLSLVMLGEEEIARKLQR
AGENFQLSQMAAVQLAEDTMSSDSIDEHAHTLEHYIVKVRTEVQNSEAFSWRSKIFVSP
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatctcaagctctactcggagctatcttcaaaactcgaactaagctcaaaggaa
gaagaacaagaagaaatcgtactcttatcggccttcgacatcgagcggagccgcctgttc
ttcgcctcctccgccaatcgcatctacaccacgcacctctcctcgttccaaaatgagcgc
gcctggagcaagacgtccttacctgcggaggtggattccgtggacttggagccgagtgac
tacatgactgccttggagtatctgatggagaaggaggcgttgataatagggacttggagt
gggctcatgttgctgcacagcgtggacggcaatggaacccaggtggttggtagagtggag
ggtgggatcaggtgcatcgcgcctagtcccgacggggatttgctcgctgtcatcaatagg
tttgggcaggttctggtcatgactcatgattgggacttgttgtacgagactgagctagag
gctgcccttgaagattttgacttttcaggtcaacccactatgtcttctagatgtgagagt
tccgtttcttggcggggtgacgggaaatactttgcgaagctaagcaaggtgtgtgattca
actacgttgcttaaggagattaaggtatgggaacgggatacaggggagttacatgctact
tcagaatcaaaggagtttatgggatcagttttagaatggatgccaagtggggcgaaaatt
gcggctgtttatgacgggaaagcagatgatgagtgtccctctatagctttctttgagagg
aacgggttggaaagaagctcgttcagaatcaatgagcaaaaggatgcaacaatagaaatt
atgaggtggaattgcacttcggatcttcttgcagctgtcgtcagatgtgaaaaacatgat
gctgtaaagatctggtttttcagcaataatcattggtacttaaagcatgaaattaggtac
tcgaagcaggatggagtgaggttcatgtgggacccaacaaaaccgttgcagttgatttgt
tggactcttggtggccatatcacgattgacaacttcatctggaatgcagctgtgatggag
aactcaatggcattagttattgatgattccaagatacttgttactcccctttctttgtac
cttatgccacctcctatgtatctgttcaatctgaaatttccgagtgctgtccgagacata
tcattttattccaagaattctaagaactgtttggctgcttttttatcggatggttgtttg
tgtgctgtagagcttccctcacctgatacttgggaagaactagaaggcaaacaatttatt
gttgaagcttccgtttctgaatcagtatttggacctcttgtgcatcttatatggttggat
tcacatatacttcttactgtttcgcattatgggtttaatcattacgtgtccagaacttca
tcaaatgaggatgggcttctcggcttctattcgcaggaaattgagcttgtatgctctgag
aatcatgtcccaggtttaccaacatgctcaggctggcatgcaaaagttttgcgtcaaaac
tctctagacggactggttgttggaattgcttccaatcccaccaaaagctgttctgcattt
attcagtttgatggtggaaaactatccgagtatacaactaggataggaactctgaaacat
gttgatatgagtttttcatcatcttgcccttggatgagtgtggtttcagttggtgacagt
ggatcattcaagcctttgccttttggacttgatgatcttggcaggttgcatgtaggtggg
aggatattatgcaacaattgcagcagtttctcggtttactctaatttggctgatcaagtg
atcacgcatttaattcttgcaactaaacaggatttgctctgtattgttggcataggtgat
atattgcatggagaattagacatgaaatatgaggacttcatccccactggtaataggaga
agagaagaaaataaaaactttatacatatatgggaaagaggtgccaaagttgttggcgtc
ctgcatggagatgaagctgctgtcatattacaaacaactcggggaaacctggaatgcatt
taccctagaaaattagtcctggcctctattgtcaatgcgttggtcgaaggacgcttcaaa
gatgcactactcatggtgaggcggcatagaatagatttcaatgtcatcgttgaccgttgt
ggttgggaagtgtttctccaatcagctgctgagtttgtcaggcaggtttataattttagc
tacataactgagtttgtttgtgctataaagaatgagaatattacagagcgactatacaaa
gatttcataactttaccttgctcaaaggacactaaagatgtgcaagctagggattcaaag
ggtctttgtgcaaataacaaggtttcttctgtcctgctggccataaggaaggctcttgag
gaacaactacctgaaagtcccgccagggagctttgcatcttgaccactcttgctcgtagt
gatcccccagcaattgaagaagctttagagagaataaaagttacccgtgaaatggaatta
tcaagttctaatgaccctaggagaatgtcttacccttctgccgaagaagctctgaagcat
ctcttgtggttatctgatgctgaggtcgtatttgaggctgctttaggcctttatgatttg
aaccttgctgctattgtcgcattgaactcccagcgggatccaaaagaatttcttccattc
cttcaagagttggaacatatgccagtcgtcttaatgcgctacaatattgacctcaggcta
cacaggtttgcaaaagctctcaaacacattgtttctgcaggagatgctcattttgaagat
tctatgaacctcatgaagaacaatcctcaactttttcctttgggacttcaacttatcact
gatcctgccaagaggaagcaagtccttgaggcctggggagatcatcttagcgatgaaaaa
tgttttgaggatgctgctacaatttatttgtgctgttccagtttggaaaaggctttgaag
tcatatcgggcttgtggtaactggagtggggtgcttacagttgctgggctccttaagatg
ggaaaagatgagataatacagctgtctcgtgagctttctgaagaacttcaagctcttggt
aaaccagggcaagctgccaaaattgctctggagtattgtggagatgttaatgggggggtg
aatttgttaattagtgcaagagactgggaggaggctttgagggttgcatttttgcacagg
agagaagatttaatctctgaagtaaagaatgcatctttggaatgtgcaagcatggtaata
ggtgaatatgaggaaggtttggagaaagtagggaagtatctggcccgctacttagctgtt
cgacagagaagattacttcttgctgcaaaggtccagtcagaggaacggtcaatgagtgat
cttgatgatgatactgcttcagaagctagcagtaatttcagtggaatgagtgcttacacc
acagggaccaggaagagcaccacctcttccatcatctcaagtgcaactagcaaggccaga
gacatgagacgccagaggaagagaggaaaaatccgtcctggaagccctggtgaggagctg
gctctggtagagcatttgaagggcatgtctctaacagctggagcgaggcgtgaacttaaa
tctttactgctttcccttgtaatgcttggcgaggaagaaatcgcgaggaagctgcaacgc
gcaggcgagaattttcaactgtctcaaatggcagcagttcaactagctgaagatacaatg
tccagtgatagcatagacgagcatgcacatactttggagcactacatagtaaaagtgagg
actgaagtgcaaaattcagaggccttctcctggcggtctaaaatatttgtttctccttaa
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