| Entry |
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| Name |
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
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| KO |
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| Organism |
aglu Alnus glutinosa (common alder)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:aglu00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133863062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:aglu03019]
133863062
03036 Chromosome and associated proteins [BR:aglu03036]
133863062
Enzymes [BR:aglu01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133863062
Messenger RNA biogenesis [BR:aglu03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133863062
mRNA degradation factors
5'-3' decay
Decapping complex
133863062
Chromosome and associated proteins [BR:aglu03036]
Eukaryotic type
Gene silencing
piRNA pathway
133863062
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:5329059..5336934
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| AA seq |
506 aa
MNNSRGRYLPGMGMGRGGGMNANPAFQSRAPQQQYVQRSMVQQHNHHHQQQQYQQQQQQQ
QQQQQQQQQQHQQQQWLRRGQLGGADSGIDEVEKTVQSEAVDSSSQDWKARLNIPAPDTR
YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT
GKTAAFCVPALEKIDQDNNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSL
KDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIR
FLPEHRQILMFSATFPVTVKDFKDRYLQKPYVINLMDELTLKGITQFYAFVEERQKVHCL
NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC
RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN
LYRIEQELGTEIKQIPPFIDQAIYCR |
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| NT seq |
1521 nt +upstreamnt +downstreamnt
atgaacaacagtagagggaggtatctgccgggtatgggcatgggccgaggcggaggcatg
aacgcgaaccctgcgttccagtcaagggctccacagcaacagtacgtgcagaggagcatg
gtgcagcagcacaatcaccaccaccagcaacagcagtatcagcagcaacaacaacaacaa
caacaacaacaacagcaacaacagcagcagcatcaacagcagcagtggcttaggaggggt
cagttgggcggtgccgattcgggcattgacgaggttgagaagaccgtgcagtccgaggct
gtggactcgagttcacaagattggaaggcaaggctaaacataccggcccctgatacacgc
tacagaactgaggatgtgacagcaactaaaggaaatgaatttgaggactactttttgaag
cgtgagttgcttatgggaatatacgaaaaaggctttgaaagaccatctccgattcaggaa
gaaagtattccaattgctttaactgggagtgatattcttgcgagagcaaaaaatggaact
gggaaaacggctgcattttgcgttccagcgttggaaaaaatcgatcaagataacaatgct
attcaagttgttatacttgttccaactcgagagttggctctccaaacatcacaagtctgt
aaagagcttggcaagcatttgaaaatccaagttatggttactacaggtggtaccagcttg
aaggatgatatcatgcggttatatcaaccagttcatttacttgttggaactcctggaaga
atattagatcttgcaaaaaaaggtgtttgcattttgaaagactgttctatgcttgttatg
gatgaggctgataagcttttgtctccggaatttcaaccttcagtagagcagctgattcga
tttctgcctgaacatcgtcaaattttgatgttttcagccacgtttcctgttacagtcaag
gactttaaagatagatatctacaaaagccttatgttattaaccttatggatgagcttact
ttaaagggtatcacacaattttatgcttttgttgaggagaggcagaaagtccactgccta
aacactcttttctccaagctgcaaataaaccaatcaatcatcttctgcaattcagtgaat
cgggttgaacttttggccaagaaaattacagaacttggctattcatgtttttatattcat
gccaagatgctgcaagaccatcgtaacagagtgtttcatgacttccgtaatggcgcatgc
aggaatcttgtttgtactgatttatttacaagaggaatagatattcaagcagtcaatgtt
gttattaactttgattttcccaagaactcagaaacttatctgcacagggttggtcgatct
ggaaggtttgggcaccttggtttagctgtgaatttgatcacctatgaagaccgctttaac
ttgtacaggattgagcaagaacttggcactgagataaagcaaattccgccttttatcgat
caggcaatttactgccggtga |
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