Alnus glutinosa (common alder): 133863075
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Entry
133863075 CDS
T10577
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aglu04131
]
133863075
04121 Ubiquitin system [BR:
aglu04121
]
133863075
Enzymes [BR:
aglu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133863075
Membrane trafficking [BR:
aglu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133863075
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133863075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
DUF7573
Rad50_zn_hook
DUF5318
Zn_ribbon_IFT122
A2L_zn_ribbon
DUF7129
Motif
Other DBs
NCBI-GeneID:
133863075
NCBI-ProteinID:
XP_062155044
LinkDB
All DBs
Position
3:complement(35209432..35211268)
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AA seq
369 aa
AA seq
DB search
MSTLEMASYWCYRCSRFVRVLSRDSSVVCPDCETGFVEAIDNPLRAVHVDGRRRRNPASA
MYMIGQRSAANPDQATTGRRIRRIGVDRGSPFNPVVVLRGPSDGRETRRFELYYDDGGGS
GLRPLPPSVSEFLLGSGFDRLLEQLSQIELNGVARFEHPPASKSAIEAMPTIAIGDGHIT
THSHCAVCKDEFELGSEAREMPCKHIYHSDCILPWLSLHNSCPVCRHELPADVESVAAEP
DRSESGQARPLDENVGLTIWRLPGGGFAVGRFSGGRGRGGDRELPVVYTEVDGGFNNGGA
PRRVSWAARGRGGREGGGFGQAFRNFFSCFRGIGSSGSSSSSNSDRPAVRRARSVSLTAS
RRRTWALEF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgctggaaatggcgtcgtattggtgctacagatgcagccgattcgttagggtt
ttgagccgggactcgtcggtggtgtgccccgactgcgagacggggttcgtggaggccatt
gacaacccgctacgggccgtccacgtggacgggcggcgcaggaggaaccctgcgagtgcg
atgtacatgatcggtcaacgctccgccgccaatccggaccaggcgaccacgggccgtcgg
atcaggaggatcggcgtggaccgcggatcccccttcaacccggtcgtcgtgctccgcgga
ccgtccgatggcagagagacacgtcgcttcgagctttactacgacgacggcggtggttcc
gggctcagaccgttgcctccgagcgtgtcggagtttctgttggggtccgggttcgaccgc
ctcctcgagcagctctcgcagatcgagctaaacggcgtcgctcgattcgagcatcctccg
gcttcgaagtcggccatcgaagcgatgcccacgatcgcaataggcgacggccacataacc
acgcattcacactgcgccgtgtgcaaagacgaattcgaattgggatcggaggcccgagag
atgccctgcaagcacatataccactcggactgcattctcccatggctctcgcttcacaat
tcctgcccggtgtgccgccacgagctgcccgcggatgtagagagtgtcgcggcggagcct
gaccgcagcgagagcgggcaggcgcggcctctggatgagaacgttgggctgacgatatgg
aggcttccgggaggtgggtttgcggtggggaggttttccgggggaagaggaagaggtgga
gaccgcgagcttccggtggtgtacacggaagtcgatggtgggttcaacaatggcggcgcg
ccgaggagggtgtcgtgggcggctagggggaggggagggagggagggcggtgggtttggc
caggcgtttcggaattttttctcgtgctttcgtggaattgggtcttcgggatcgagttcg
agctctaattctgataggccagcggtgaggagagccagatcggtctctttgactgcgagt
aggcggaggacttgggctctggagttttga
DBGET
integrated database retrieval system
