Alnus glutinosa (common alder): 133863081
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Entry
133863081 CDS
T10577
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133863081
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
133863081
Chromatin remodeling factors
BAF complex
133863081
PBAF complex
133863081
GBAF(ncBAF) complex
133863081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133863081
NCBI-ProteinID:
XP_062155052
LinkDB
All DBs
Position
3:6095084..6110772
Genome browser
AA seq
2247 aa
AA seq
DB search
MQSVGGGGGGPSRVGPGGRAASTSSAASPSSSSSAVSTPHLGFDSMQQQQQQQQQIGSRQ
SLQQQLHRKPEGNEALLAYQASLQGVMGGNNFASSPGSMQLPQQSRKFIDLAQQHGSSHE
GPHRSQAVEQQVLNPVHQAYLQYAFQAAQQKPSLAMQSQQHAKMGMLGPPPGKDQDIRMG
NLQVPSQAQASSSRNSSEHFGRGEKQMDQGQQPAPEQRSELKPSTQPTGIGQLIPGNMVR
PLQVPQAQQSTQNMANNQIAMSAQLQAMHSWALERNIDLSLPANANLMAQLIPIMQSRMV
PQQKANENNMGAQSSPVPVSKQQVASPPVVSESSPHANSSSDISGQSGSAKARQIVSPSP
FGSTSNAGLVNHSNNISSQQFATHGRENQVPSRQPSVIGNGMPSMHPPQSSANMSQGVDH
SLNAKHSLSSPETLQMQYLRQSNRSSPQAAISSNDVGSGSNIPSQGGSTIQTPQQHFGFT
KQQLHVLKAQILAFRRLKKGDPGLPQELLRAIAPPPLELQLQQQFPPAGGNNQDKSAGNI
VAEHSRHMESNEKDSHAVASINGHSLSKEEALGGDEKPTVTTARNQGVPAVIKEPTPVVP
AGKDDQQSTVFSVKSDQDPERGINRTPVRSDFPADRGKTIAPQGAVSDAVQVKKPAQAST
APQPKDVGSARKYHGPLFDFPFFTRKHDSFGSTMMVNNNNNLTLAYDVKDLLFEEGMEVL
TKKRSENLRKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDLQARLRDEIDQQQQEIM
AMPDRPYRKFVRLCERQRMELTRQVQASQKAMREKQLKSIFQWRKKLLEAHWAIRDARTA
RNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSVPGEAAERYAV
LSSFLSQTEEYLHKLGNKITATKNQQEVEEAANAAAAAARSQGLSEEEVRAAAACAGEEV
MIRNRFMEMNAPKDSSSVSKYYTLAHAVNERVARQPSMLRAGTLRDYQLVGLQWMLSLYN
NKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSEFHTWLPSAS
CIFYVGGKDQRSKLFSQEVCALKFNVLVTTYEFIMFDRSKLSKIDWKYIIIDEAQRMKDR
ESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKE
GPTQNPEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSSIQG
AIYDWIKSTGTLRVDPEDEKLRVQKNPIYSAKVYRTLNNRCMELRKTCNHPLLNYPYYND
LSKAFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLIYRRIDGT
TSLEDRESAIVEFNSPNSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVAR
AHRIGQKREVKVIYMEAVVDKVSSHQKEDELRSGGTVDMEDDLAGKDRYMGSIESLIRNN
IQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQENLHDVPSLQEVNRMIAR
SEEEVELFDQMDEELDWTEEMTRYDQVPKWLRASTREVNTTMANLSKRPSKNTLLAGNIG
KESSEIGSDSSPKTERKRGRPKGKKHPNYKELDDEIGEYSEASSDERNGYSIHEEEGDIG
EFEEDEFSGAVGALPINKDQSEEEGPVCDGGYEYPRASEITRNNHILEEAGSSGSSSDSR
RLTQVVSPSVSSQKFGSLSALDARPGSLSKRLPDELEEGEIAVSGDSHMDHQQSGSWIHD
REEGEDEQVLQPKIKRKRSLRVRPRYTMERPEEKPGNEPQSSQRGDSSLSPFPVDNKYHA
QLKTDPETKARGESNTFKHDQNDSSSKSRRNLPSRKIANMSKLHASPKSSRLNCTSSPAE
DVAEQLREGWDGKSMNSTGTSAFGAKMPDNMQRRCKSVISKLQRKIGKEGPQIIPLLTDL
WKRIENSGYMGGSGNNILDLRKIDLRIDRLEYSGVMELVIDVQFMLKSAMHFYGFSHEVR
SEARKVHDLFFDILKNGFPETDFREARNALSFSGPFSATASPSPRQAAIGSSKRHKLVNE
VESDPGPPQKPPQRGLISSGEDAKIRGHIPQKESRIGSSREQSQQEDSPLLTHPGELVIC
KKKRKDREKSVVKPRTGSAGPASPLSMGRSMRSPGPGSMPKDTRQTPQSGWANQPAQPAN
GDGGSVGWANPVKRLRTDSGKRRPSHL
NT seq
6744 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgttggaggaggtggaggagggcccagccgggtggggccgggcgggcgggcg
gcatctacgtcttcggctgcgtcgccgtcctcgtcatcttcggccgtgtcgacgccgcac
ttgggtttcgattcgatgcagcagcaacagcagcagcagcagcagatagggtctaggcag
tcactacaacaacagttacatagaaaacctgagggcaacgaagcccttctagcatatcaa
gccagtctccaaggagttatgggaggaaacaacttcgcttcatctcctggctctatgcaa
ctgcctcaacagtcaaggaaattcattgacttggctcaacaacatggttcctcccatgag
ggcccgcataggagtcaagcagttgagcaacaagtgctaaatccagtccatcaagcttat
ctacaatatgctttccaggctgctcaacaaaagccatctttggccatgcaatcacagcag
catgctaaaatgggaatgttgggccctccaccggggaaggatcaggacattcgaatggga
aatctgcaagttcctagtcaggctcaggcatcatcatcaagaaactcttctgaacatttt
ggtcgtggtgaaaagcagatggatcaaggtcagcaaccagcccctgagcagaggagtgag
ctaaaaccttcaacccagccgacaggcattggacaattaatacctggaaatatggtgagg
cctttgcaagtaccacaagctcagcagagtacccaaaacatggcaaacaaccagatcgca
atgtctgcccagttgcaggcaatgcattcatgggcacttgagcgcaatattgatctctcg
ctgcctgcaaatgccaacttgatggcacagctcattccaataatgcagtctaggatggtt
ccacagcaaaaggcaaatgaaaacaatatgggtgcacagtcgtcgcctgttccagtgtca
aagcagcaggtcgcttccccaccagttgtgagtgagagttctccccatgctaattcatca
agtgatatatctgggcagtctggctctgcaaaagcaaggcagattgtttcacccagcccc
tttggttcaacttcgaatgctggcctagttaaccactctaacaacatttcatcacagcaa
tttgctactcatggcagagagaatcaggtgccttctagacagccttctgtgattggtaat
ggaatgccttcaatgcatcccccacagtcatctgccaacatgagtcagggtgtggatcat
tctttgaatgcaaaacattcgttaagcagcccagaaactctgcagatgcagtacctcagg
cagtcaaatcgatcttctccacaagctgcaatttctagtaatgatgtggggtctggcagc
aacatcccttcacaaggtggttcgactattcagacgcctcaacagcactttggattcacc
aaacagcaattgcatgttcttaaagcacaaatactagcatttcggcggctgaagaaagga
gaccctggtctccctcaagaacttcttcgagctattgctccaccgccccttgagttgcag
ctgcagcagcaatttcctcctgcaggaggaaataatcaggataaatctgctgggaatatt
gtggctgaacattcaaggcatatggagtctaatgagaaggattcacatgctgtggcatca
attaatggacatagtttgtcaaaagaggaagctctagggggggatgagaaaccaacagtc
accacagctcgtaatcaaggtgtgcccgctgtaataaaggaacctacaccagtggtgcct
gctggaaaagacgatcagcaatccactgtattttctgttaagtcagaccaggatcctgaa
cgtggtattaataggactcctgttagaagtgactttccagcagataggggaaagactatt
gccccacagggagctgtatctgatgcagtgcaagttaagaaacctgcacaagcgagcact
gccccccagccaaaagacgttggctctgccagaaagtatcatggacccctatttgatttc
ccttttttcactaggaaacatgactcctttgggtcgacaatgatggttaataacaataat
aatctgacattggcatatgatgtcaaagatcttctttttgaggaaggcatggaagtgctt
actaagaaaaggtctgaaaatttaagaaagattggtggtttactggcggtaaacttagag
aggaaaaggattaggccagatcttgtcttgaggttgcaaattgaagagaaaaagcttcga
cttttagacctacaggcacggttaagggatgaaattgatcaacagcaacaggagataatg
gcaatgcctgacaggccatataggaagtttgttcggctgtgtgagcgtcaacgtatggag
ctcaccagacaagtacaggcctctcagaaagctatgagagagaagcaactgaaatccata
tttcagtggcgtaagaagcttcttgaggctcactgggcaatccgcgatgcacggactgcc
cgcaacaggggagttgcgaaatatcatgagagaatgttgagggagttctcgaaaagaaag
gatgatgataggaataagagaatggaagcattgaagaacaatgatgttgagaggtatagg
gagatgttgctggagcagcaaacaagcgtcccaggtgaagctgctgagagatatgctgtt
ctctcttcattcttgtctcagacagaagaatatctacataaactgggaaataaaataaca
gccaccaaaaatcaacaggaagtggaggaagcagcgaatgcagctgcagccgctgcacga
tcgcagggcctctcagaagaagaagttagggcagcagcggcttgtgccggggaggaagta
atgataagaaatcggtttatggaaatgaatgcaccgaaggatagttcatctgttagcaaa
tattatactctcgcccatgctgtgaatgaaagggttgcaaggcaaccctcaatgttacgg
gctggaaccttgagagactatcaacttgttggattgcaatggatgctttctttgtataac
aataaattaaatggaatcttggcagatgagatgggtcttgggaagactgtacaggtaatg
gcattgattgcttacctgatggagttcaaagggaactatggcccacatcttataatagtt
ccaaatgctgttttggtaaattggaagagcgagttccatacttggcttccatctgcgtcg
tgcattttttatgtgggtgggaaggatcaacggtcaaaattattctctcaagaggtttgt
gctctgaaatttaatgtgctcgtgacgacttatgagtttatcatgtttgatcgttcgaaa
ctttcaaaaattgattggaagtatatcataattgatgaagcacaaagaatgaaggatagg
gaatcagttttagcacgtgatcttgatagatatcgctgccagaggcgcctgcttctcact
gggacaccgttgcagaatgatctgaaggaactctggtcacttttaaatctacttcttccg
gaagtgtttgataataggaaagcatttcatgattggttctcaaaaccttttcaaaaggaa
ggtccaacacagaatccagaagatgactggcttgagactgaaaaaaaggtcatcatcatc
caccgacttcatcaaattctagagccatttatgctcaggcgtcgtgttgaggatgtggaa
ggctcacttccacctaaggtttccatagttttaagatgtaggatgtcatctattcagggt
gccatttatgattggatcaaatccaccggtactcttcgagttgatcctgaagatgaaaag
ctcagggttcaaaagaatccaatttactcggctaaggtgtatagaactttgaataataga
tgtatggaacttcggaaaacctgcaatcatcctttgctcaattacccatattacaatgac
ttatcgaaggcttttctcgtaagatcttgtgggaaattgtggatcctagatagaattcta
ataaagcttcagagaactgggcatcgagtactgctctttagtaccatgacaaaactcctt
gatatattggaggaatacttgcaatggcggcgactcatctacagacgaatcgatggaaca
accagtttagaagatcgtgaatcggctattgttgagttcaacagccctaattcggactgc
ttcattttcttgcttagtattcgtgcagctggtcggggtcttaatcttcagtctgctgac
acagttatcatatatgatcctgatccaaaccctaaaaatgaggagcaggcagttgcaaga
gcccaccgtattggacagaaaagagaagttaaagtcatttatatggaagcagtggttgat
aaagtctctagccatcagaaagaagatgaactaagaagtggaggtacagttgatatggag
gatgaccttgcgggtaaagatcgctatatgggatctattgagagcctgataaggaataac
attcagcaatataaaattgatatggctgatgaagttattaatgctgggcgctttgaccag
agaacaacacatgaagagagacgcttgactttagagacattgttgcatgacgaggagagg
tatcaagaaaatctccatgatgttccctcgctgcaggaggtcaatcgcatgattgctagg
agtgaagaggaagttgaattgtttgatcaaatggatgaggaactggattggactgaggag
atgacgaggtatgaccaggtacctaagtggcttcgagcgagtactagagaagtaaatacc
actatggctaatctttcgaaaagaccatcaaagaacactttgttggctggtaatattggc
aaggaatctagtgaaataggttctgattcatctccaaaaactgaaaggaaaaggggacgg
cccaaaggaaaaaagcatcctaattacaaggaattagatgatgaaattggggaatactct
gaagcaagttctgatgagagaaatggatactctatacatgaagaagagggagatattggt
gagtttgaagaggatgaattcagtggcgctgttggagcactgccaatcaataaagaccaa
tcagaagaggaaggtccagtttgtgatggtggttatgagtacccccgggcttcagaaatc
accagaaataatcatatactagaggaagcaggttcctcgggatcatcctcagacagtcga
agattgacacaagtggtatcgccttctgtttcttcccagaaatttggttccctgtctgca
ttagatgctaggccaggttctctatcaaaaaggctgccagatgaactagaggagggggaa
attgcagtatctggagattctcacatggatcaccaacaatctggaagttggattcatgat
cgtgaagaaggggaagatgagcaggttttgcaacccaaaataaaacgaaaacgtagtcta
cgggttcgtccccgttataccatggaaaggccagaggagaagcctggcaatgaacctcaa
tcttctcaacgtggagattcatctctgtcgccattcccagtggacaataagtatcatgct
cagctaaagactgaccctgaaacaaaagcacgtggagagtccaatacttttaagcatgat
caaaatgattcatcctcaaaaagtcggcggaatttgccatcaaggaaaatagctaatatg
tcaaaattgcatgcttcgccaaaatctagcagattgaattgcacgtcttctcctgcagaa
gatgttgccgaacagttgagagaaggttgggatggtaaatctatgaattcaactgggaca
tcagcttttggcgctaagatgcctgacaacatgcagagaaggtgcaaaagtgtaattagc
aaactccaaaggaaaataggtaaggaaggtcctcaaattatacctctgcttacagatttg
tggaagaggattgaaaactctgggtacatgggtggatcaggaaataatattttggattta
cgaaagatcgatctgcgtatagacagattagagtatagtggagtgatggagcttgtgatc
gatgtgcagttcatgttgaaaagtgcaatgcatttttatgggttctcacatgaggtgaga
tctgaagcaaggaaagtgcatgatctcttttttgatatcttgaaaaatggatttccagag
acagattttcgagaagctagaaatgcactctctttttctggcccattttctgccactgct
tccccatccccaagacaggcggccattggctcaagtaagagacacaagttggtgaatgag
gtggaatctgatccaggccctccacagaagccacctcaacgtggactcatttccagtggg
gaagatgcaaaaatcagaggccatataccccagaaggaatcaaggattggcagtagccgg
gagcaaagtcagcaggaagattcaccacttcttactcatccaggggagctggtgatctgc
aagaagaagagaaaagacagggagaagtcagtggtgaagcctaggactggatcagctggc
cctgcttcaccccttagcatgggtcgtagtatgagaagtcccggtccaggttcaatgccc
aaggacaccagacagactccacaaagcggatgggccaaccagcctgctcaaccggcaaac
ggggatggcgggtctgttggttgggcaaatcctgtaaagaggttgaggacagattccggg
aaaaggaggccaagccatctatga
DBGET
integrated database retrieval system
