Alnus glutinosa (common alder): 133863447
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Entry
133863447 CDS
T10577
Name
(RefSeq) phytochrome A-2
KO
K12120
phytochrome A
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133863447
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
PAS_9
HisKA
PAS_8
DUF4987
Motif
Other DBs
NCBI-GeneID:
133863447
NCBI-ProteinID:
XP_062155361
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Position
3:complement(171867..177911)
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AA seq
1124 aa
AA seq
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MSSSRPSHSSSNSGRSRHSARIIVQTTVDAKLHADFEESGDSFDYSSSVRVTGAVSGDQQ
PRTDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDH
PVLGIGTDVRTIFTAPSASALQKALGFWEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMVRLCDTMVQEVFELTGYDRVM
AYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHARHVKV
LQDEKLPFDPTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGDEEGDCSNSVQPQK
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLC
DLLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIWRLGVTPSDFQLHDIASWLSEYHMD
STGLSTDSLYDAGFPEALALGDVVCGMAAVRITSKDMIFWFRSHTAAEIRWSGAKHEPGE
KDDGMRMHPRSSFKAFLEVMKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDISTNAIH
MKLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLINGWNTKIADLTGLPVDKAI
GKHLLTLVEDSSTDTVKRMLYLALQGNEEQNIQFEIKTHGSKSDSGPISLVVNACASRDL
RDTVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPA
MTKLSGWTREEVIDKMLLGEVFGTHTACCRLKNQEAFVNLGIVLNNAMTGQEPEKVSFGF
FARSGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALNVQRLLEQTALKRLKALA
YIKRQIRNPLSGIIFSRKMMECSELGFEQKELLLTSAQCQRQLSKILDDSDLDSIIEGYL
DLEMVEFTLNEVLVASISQVMTNSNGKGIRMVNDVAKEIVNETLYGDSLRLQQVLADFLS
ISVNYTATGGHLILVASLTKDQLGQSVHLAHLELRIIHSGGGVPEALLNQMFGSDGDASE
EGISLLISRKLLKLMNGDVQYLREAGKSTFIISVELAAAHKLQA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcaaggcccagccactcgtcaagcaattcagggcgctcgagacacagtgct
aggatcattgtgcagaccactgtcgatgcaaagctccatgcagattttgaggagtcaggt
gattcttttgattactcaagctcagtgcgggttaccggggcagttagcggagatcaacaa
cctaggactgacaaagtaacaacagcttacctccatcacatacagaaagggaagctgatc
caaccatttggttgcttgctagccttggatgagaaaactttcaaagtcattgcatacagt
gagaatgctcctgaaatgctgactatggtcagccatgcagtcccaagcgttggggaccac
ccagttctcggcattggaacagatgtgagaaccatattcactgcccccagtgcctctgca
ttgcaaaaggccctgggattttgggaggtttctctcttgaatcccatcttagttcactgc
aagacatctgggaagcccttttatgcaattgtccatcgggtaacgggtagtttgatcatc
gacttcgagccggtcaagccttatgaagtccccatgactgctgccggggccctgcaatca
tacaagcttgcggcgaaagcaattacccgattgcagtcattaccaagtggcagcatggta
aggctttgtgatacaatggttcaagaggtttttgaactcactggttatgacagggtgatg
gcatataaatttcatgatgacgatcatggggaagtggtctctgagatcacaaagccagga
ctagaaccatatctgggtttgcattatccagctaccgatatccctcaggccgcacgcttc
ttatttatgaagaataaggtccgtatgattgttgattgtcatgcaagacatgtgaaagtg
cttcaagatgagaagcttccatttgatccgacgttgtgtggttcaaccttaagggcaccg
cacagttgccatttgcagtacatggagaatatgaattccatcgcctctctagtgatggca
gttgtagttaatgagggggatgaagagggagactgttctaattctgtgcagccacaaaag
agaaagagactctggggtttagtagtatgccataacacaactccgaggtttgttccattc
cctcttaggtatgcctgtgagtttctagctcaagtatttgccatccatgtgaataaggaa
ttggagttggaaaatcaaattgttgagaagaacatcttgcgtacccaaacactcttgtgt
gatttgctgatgcgagatgcacccttgggaattgtgtcacagagcccaaatataatggat
cttgtgaagtgtgatggagctgctttattgtacaagaacaagatatggagactgggagta
actccaagtgatttccagctgcatgacatagcctcatggctctcagagtaccatatggat
tcaacaggtttaagtacagatagcttgtatgatgcagggttcccggaggctcttgctctt
ggtgatgtagtatgtggaatggcagctgtgaggataacttccaaggacatgattttctgg
tttcgatcccacactgctgcagaaattcgatggagtggtgcaaagcatgaacctggtgag
aaggatgatggtatgaggatgcacccaagatcgtcattcaaggctttccttgaagttatg
aagacaaggagtttaccctggaaggactatgaaatggatgcaatccattctctgcagctt
atcttgaggaatgcattcaaagatattgaaacaatggatataagcaccaatgccatccat
atgaagctcagtgacctcaaaattgaagggatgcaagaactagaagcagtgacaagtgag
atggtccgtttaattgaaacggccacagtgccaattctggcagttgatgttgatgggctg
attaatgggtggaacacaaagattgctgatttaactggtcttcctgttgataaagcaatc
ggaaagcatttgctcacacttgtggaagattcttcaactgatacagtcaagaggatgttg
tacttggcattgcagggcaatgaagagcagaatatccaatttgagatcaaaacgcatggg
tctaagagtgattctggtcccatcagcttagtagtgaatgcttgcgcaagtagggatctt
cgagatactgttgtgggtgtttgttttgtggcccaagatatcactggtcagaagatagtt
atggacaagttcactcggattgaaggtgattacaaagctattgtacaaaacccaaaccct
ttgatccccccaatatttggtacggatgaatttgggtggtgttctgagtggaatccagca
atgacaaagttaagtgggtggacacgagaagaagttatagataaaatgcttttgggagag
gtttttgggacacacacggcatgctgtcgtctcaagaatcaagaagcttttgtaaacctt
ggaattgtacttaataatgccatgactggtcaggaacctgaaaaggtctcttttggtttc
tttgctcggagtggaaagtatgtagaatgcctgctatgtgtgagtaagaaattggataga
gagggtgcagtcactggagtcttttgcttcttgcagcttgctagccaagagctgcaacaa
gcacttaatgtccagcgtttattagagcaaactgccttgaagagattgaaagcattggct
tatataaaaaggcagatacggaatcctctgtctgggattatattttctcggaaaatgatg
gagtgttctgagttaggatttgaacagaaagagcttctgcttactagtgcccagtgccag
cgccagctcagcaagattcttgatgactcagatcttgatagcataattgaaggctacttg
gatctcgaaatggttgagtttacactgaatgaagtactggttgcctctataagtcaagtc
atgacaaacagcaatggaaagggaatccgaatggtcaatgatgtggcaaaggagattgtg
aatgaaaccttatatggtgatagtcttaggcttcaacaggtcttagctgatttcttgtcg
atatcagtcaactacactgcaactggaggccacctcattcttgtagccagtttgaccaaa
gatcagttggggcaatctgttcatcttgcacatcttgagctcaggataatacattcaggc
ggaggggtgccagaagcattgctgaaccagatgtttggaagtgatggagatgcatctgag
gagggcatcagcctgctcattagcagaaagttattaaagctcatgaatggagatgtacag
tatctgagggaagcaggcaaatcaaccttcatcatttctgttgaacttgctgcagcacat
aagttgcaggcgtaa
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