Alnus glutinosa (common alder): 133863521
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Entry
133863521 CDS
T10577
Name
(RefSeq) formamidopyrimidine-DNA glycosylase-like isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133863521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aglu03400
]
133863521
Enzymes [BR:
aglu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
133863521
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
133863521
DNA repair and recombination proteins [BR:
aglu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133863521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
133863521
NCBI-ProteinID:
XP_062155475
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Position
3:complement(27394708..27410705)
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AA seq
404 aa
AA seq
DB search
MPELPEVEAARRAVEEHCVGKKIKKAVIANDTKVIEGVSPSDFEAALLGKTVVSARRKGK
NLWLQLDSPPFPSFQFGMSGAIYIKGVAVTKYKRSAVNDTDEWPSKYSKFFIELDDGLEL
SFTDTRRFARVRLLTDPAAVPPISELGPDALLEPMTVDEFIESLSKKKIAIKALLLDQSY
IAGIGNWVADEVLYQARIHPLQIAFSLSKENCANLHKCIKEVVEKAIEVGADSSQFPKNW
IFHSREKKSKAFVDGKKIDFIKAGGRTAAYVPELQKLSGNQAAKAVGEPKKRTSKKKSGG
NDDDDSDEPASKEEEIIESDELKKGPKPRGRGKRPSMKRKTEDSDDDEGDDDNIGGAATA
DSDNDEVQKKKMENTTTNKRAKADKASERKVQTSQNSKAKKKAR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccggaggtggaggcggcgaggcgggccgtggaggagcactgcgtgggg
aagaagataaagaaggcggtcatagcaaatgacaccaaagtcatcgaaggagtctcgccc
tcggacttcgaggccgctctcctgggcaagaccgtagtttcagcccgccgcaagggcaag
aacctctggctccagctcgattcccctcccttcccttccttccaattcggcatgtcgggt
gctatatatattaagggtgttgcagttacaaaatacaagaggtctgctgttaatgacact
gatgaatggccttccaaatactcaaagttttttatagaacttgatgatggtttggagctg
tctttcactgacacgaggcgctttgctagagtccgcttactcacagatccagctgcagta
ccccccatatctgagcttggacctgacgcactattggagcctatgacagttgatgaattt
attgaatccttgagcaagaagaaaattgcaattaaggctttattacttgaccagagctac
attgcaggtattggcaattgggtcgcggatgaagtgctataccaagcaagaattcatcca
ctgcaaattgctttcagcctgtccaaggaaaactgcgcaaacttacacaagtgcataaaa
gaggtcgttgagaaagcaattgaagttggggcagatagtagtcagtttcctaaaaactgg
atatttcactcccgcgaaaagaaatctaaggcttttgttgatgggaagaaaattgatttc
atcaaagctggtggcaggacagcagcatatgtaccagagttgcaaaagctaagtggaaac
caagcagcaaaagcagtaggtgaacccaaaaagagaacttcaaagaaaaaaagtggtggg
aacgatgacgatgacagtgatgaaccggcaagcaaggaagaagaaattattgaaagtgat
gaactgaagaaaggacctaagcctagaggtcgaggtaaaaggccttcgatgaaaagaaaa
actgaggatagtgatgatgatgagggtgacgatgataatattggcggtgctgctactgct
gatagtgataatgatgaagtccaaaagaagaaaatggaaaatacaaccactaataaaaga
gctaaggcagataaggcatcagagagaaaagtgcaaaccagtcaaaatagtaaggcaaag
aagaaagcaaggtag
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