KEGG   Alnus glutinosa (common alder): 133863838
Entry
133863838         CDS       T10577                                 
Name
(RefSeq) B-type cell cycle switch protein ccs52B
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133863838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aglu04121]
    133863838
Ubiquitin system [BR:aglu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     133863838
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_EML Beta-prop_Aladin ANAPC4_WD40 Beta-prop_IFT140_1st WDR55 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_1st MIOS_WD40 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_RFWD3 Peptidase_M10_C Aldo_ket_red
Other DBs
NCBI-GeneID: 133863838
NCBI-ProteinID: XP_062155940
LinkDB
Position
3:complement(35106392..35109882)
AA seq 480 aa
MDSPQPRKPGLNLPSGMSETSLRLETFSDSFRAVPNLGSPRTISNLSSPSKSSTCSDRFI
PCRSSSRLHTFGLIEKASPAKEGGNESYSRLLRMELFGSDFGSFSPAGPGSPMSPSKNML
RFKTESSGPSSPYSPSILGHDSGFSSETSTPPKPPRKVPKTPHKVLDAPSLQDDFYLNLV
DWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPHDGVCSVQWTREGSYISIGTNVGQVQ
VWDGTQCKKVRTMAGHQTRTGVLAWNSRILASGSRDRNILQHDLRVPTDFVSKLVGHKSE
VCGLKWSNDDRELASGGNDNQLLVWNQHSQRPALRLTEHTAAVKAIAWSPHQTGLLASGG
GTADRCIRFWNTTNGHQLNSIDTGSQVCNLAWSKNVNEVVSTHGYSQNQIMVWKYPSLSK
VATLTGHSMRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSMKTTPVKDTGLWSLGRTFIR
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggattcaccacaaccaagaaaacccgggctcaatctcccgtctgggatgtccgagaca
tcgctgcgcctcgagacattttcggattcttttcgtgcagtgccgaacctgggatcgcct
cgaacgatatcaaacttgtcgtcgccctcgaaatcttcgacgtgtagtgacagattcata
ccctgcagatcgtcatcgaggcttcacactttcgggctaatcgagaaggcgtcgccagct
aaagaagggggaaacgagtcgtattcgaggttgttgagaatggaacttttcgggtctgat
tttgggtctttttctcctgcaggtccagggtcgcccatgagtcccagcaagaatatgctg
aggttcaagaccgagagctcggggccgagttcgccgtactctccatcaattttaggtcat
gatagtgggttctcttccgagacttcgactcctcccaagccacctcgcaaggtccccaag
actccccataaggttctagatgccccatcacttcaagatgacttttacttgaacctagtg
gattggtcctctcaaaatgtccttgcagttggattaggcacctgtgtttatctgtggagt
gcttcaaacagcaaggtgacgaagttgtgtgacttgggacctcatgacggtgtgtgttca
gtacaatggacccgagagggttcatacatatcaattggtacaaatgttggtcaagttcag
gtctgggatgggactcagtgcaagaaagttcgaaccatggcagggcatcaaacaagaact
ggagtcctggcatggaattcacgcatattagcttctggaagcagggaccgcaacatactt
caacacgatcttcgggttccaactgactttgttagcaagctagttggtcacaagtctgag
gtatgtgggctaaaatggtccaatgatgacagggaacttgcatctggtggcaatgataat
cagctactggtctggaaccaacattctcagcgaccagctttgagactgacagagcacaca
gctgccgtcaaggccattgcttggtcaccccaccaaactggccttcttgcatctggaggt
ggaacagcagatcgatgtattcgcttctggaacaccaccaacggccaccaattgaacagt
attgacacggggagccaggtttgcaatcttgcgtggagtaaaaatgtgaatgaagtagta
agcactcatgggtattcccagaatcaaattatggtgtggaagtatccatcactgtcaaag
gttgcaactctaactggacatagcatgcgagtactctaccttgcagtatcacctgatggt
cagacaatagttactggagcgggagatgaaactctcagattttggaacgtcttcccatct
atgaaaacgacaccagttaaagatacaggtctttggtcactaggacgaacctttatacga
tga

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