Alnus glutinosa (common alder): 133863934
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Entry
133863934 CDS
T10577
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3
KO
K03255
protein TIF31
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
aglu03012
]
133863934
Translation factors [BR:
aglu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133863934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
CLU_N
TPR_NPHP3
TPR_2
TPR_9
PAM2
TPR_8
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
133863934
NCBI-ProteinID:
XP_062156079
LinkDB
All DBs
Position
3:27436657..27450027
Genome browser
AA seq
1707 aa
AA seq
DB search
MAPRSGRGKASKAKAERKKKEEKVVPTVLDITVITPYDSQVILKGISTDRILDVRRLLAV
HVETCHLTNYSLSHEVKGQRLNEKVEVVTLKPCSLRMVEEDYTEEAQAVAHVRRLLDIAA
CTTRFAKPRRSPSTPESRSKKSRAHQAHPHQQAKSNSGPPTPSDGGAPSSPEPSVSAAIS
ENLGMAAVHPTPKLSDFYEFFSFAHLSPPILHLRRCEQKDVPERRDGDYFEIQIKICNGK
LIRVVASVKGFYTVEKRLLQSHSLVDLLQQLSRAFANAYESLIKAFVEHNKFGNLPYGFR
ANTWIVPPSIADSPSDFPLLPTEDENWGGNGGGQPRNGEYDLRSWATDFAILAHLPCKTE
EERAVRDRKAFLLHSQFVDISIFKAAAAIRRLIDSNMHAKDDATRSQTDLVRHEDRAGDL
SIIVKHDTTDASTKSEVKINFNEISNMPDKEAAQRNLLKGLTADESVVVHDTSSLGVVIV
RHCGYTATIKVVGNVKKEKFETQDIEIDEQPDGGANALNINSLRFLLHKFTAESSGGGWS
PQSNLDGLEMYRCLVRRVIKESLKKLKEKPIDSKKSIRWELGSSWVQYLQKQETPPGNDS
KSPDHDNEALHAVKGLGKQFKFLKKREMKENDSGPCNLDMETDLGELSNGEVNRTEELEK
LISEDAFLRLKETGTGLHLKSIDELIRLAHEYYDEVALPKLVTDFGSLELSPVDGRTLTD
FMHLRGLKMHSLGRVVELAEKLPHIQSLCIHEMVTRAFKHVLKAVVASVDNIEELPAAIA
ASLNFLLGCCEMEDDQELNDDHLLKFEWLQIFLARRFGWMLKDELRHVRKLSILRGLCHK
VGLEMVSRDYDMENPYPFKKYDIISMVPVCKHVGCSSADGRNLLESSKVALDKGKLEDAV
NYGTKALAKMMAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDH
PDTMKSYGDLSVFYYRLQHVELALKYVNHALFLLHFTCGLSHPNTAATYINVAMMEEGMG
NVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQA
KLGPEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASIASKGHLSVSDLLDYISPDQ
DSKGSDAQRKQRRAKVLQLSDKSHQEQGDAIVDDDLLYDGSENTAGTKDGNTEVKVSKVY
PEEPEENDDITRYGLKVACEVVEEFTSDEGWQEANSKGRSTKTPGRKFGRRLPVLAKLNV
SNGKHSNFKDIIYRRDLISPEQKATPKTNSTELFPLKQSKAGCLSSGEDSVNVRAKAPVS
KVPTSPATLTSLASKSVSYKEVALAPPGTILKPLLEKVEELNEEKTEIQIHNIPHEISKD
EESSNNSVVEAIPKDVEIEGTNEKSTQMETTTPKLEEVSCSSDQVKPVETKGSKLSAAAE
PFNPVSLSMPHPLNSVSVTSIYDVNVSQGMLAEPVITPVGARIPCGPRSPLYHRNNYSFR
MKHGHSRYPTPSKERGKFGAPRMNPHAPEFVPGRAWQTNPSDAHCTTQTESDSAIETSRA
EEERLDDKSNTEVKDGVSKKSFSGSEKLELARQILLSFIVKSVRHNMDPVGEPAVSEKNL
EFSENSSDAIANDSAIIKILYDSEGKKDLVSQSCDVKQPKTAADENKKKNGDGEGFIVVR
KRRRNRQQFTNSVTGLYNQQSICASVR
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaggtcaggcagagggaaggcaagcaaagccaaggcagaaaggaagaagaaa
gaagaaaaagtagtgcctactgttcttgacatcactgtcatcaccccatatgattcacaa
gttattctcaagggtatctccaccgacaggatacttgatgtaaggaggctattggctgtt
catgtagaaacatgccacctcacaaactattctttatctcatgaggtcaaagggcagaga
ttgaatgagaaggtagaagtggttacccttaaaccgtgtagtttgagaatggttgaagag
gactataccgaggaagcccaagccgttgcgcacgtaaggaggctactggacatcgcggcc
tgcaccacgaggttcgccaagcccagaagaagcccatcaacaccggaatccaggtccaag
aagagcagggcccaccaggcccatccccaccagcaggccaagagtaactctggcccacct
acaccgtccgatggcggagccccgtcgtcaccggagccgtccgtttccgcggcgatctcg
gagaacctcgggatggccgccgttcaccccacgccgaagctctccgacttctacgagttc
ttctcgttcgctcacctctctccacctattctacatttgaggagatgtgagcagaaggat
gtaccagaaaggcgtgatggggactattttgaaattcagattaagatctgcaatgggaag
ctaatacgagtggttgcatcagtgaaagggttctataccgtggaaaagcggcttctacaa
agccactccctggtggatcttctgcaacagcttagccgagcttttgccaatgcatatgaa
tctttaataaaagcttttgtagaacataataagtttggtaatcttccatatggttttcga
gcaaatacatggattgttcctccgtctattgctgattctccatcagacttcccattgcta
ccaacagaagatgaaaattggggtggcaatggcggtggccagccaagaaatggtgaatat
gatcttcgatcctgggcaacagattttgccatattggctcaccttccttgcaaaactgag
gaggagagggcggtccgagaccggaaagcgtttttgcttcatagtcaatttgttgatatc
tcaatctttaaagctgctgcagcaatacgacgtctcattgattccaatatgcatgcaaag
gatgatgctacaagaagtcaaacagatttagtacggcatgaggatcgtgctggggatttg
tccattatagtaaaacatgatacaactgacgcaagcacaaaatcggaagtaaaaattaat
ttcaatgagatatccaatatgcctgataaggaagctgctcaaaggaatttgcttaagggg
ttgactgcagatgaaagtgtagtggttcatgatacttcctccttgggtgttgtcattgta
agacattgtggatacactgcaacaataaaggtggttggtaatgtgaagaaggaaaagttt
gagactcaagatattgaaatagatgagcaaccagatggaggagcgaatgctcttaacatt
aacagcttgaggtttctgcttcataagtttactgctgaatcatcaggaggaggttggtca
cctcagtctaacttggatggtttagaaatgtatagatgtctggtaagaagagtaatcaaa
gagagcttgaaaaagttaaaggaaaagccaattgattctaagaagtccatcagatgggaa
cttggttcttcttgggtacaatatctacaaaagcaggaaactccaccaggaaacgattct
aaaagccctgatcatgataatgaggctttacatgctgtcaaaggtcttggaaagcagttt
aaatttttgaagaaaagggaaatgaaagaaaatgactctggaccttgcaatctagacatg
gaaactgatttgggagaactaagcaatggggaagtcaacagaacagaagaactggagaaa
ctaatttctgaagatgccttcttgcgtctgaaagaaactggaactggtcttcatttaaag
tcaatagatgagcttatcaggctagcacatgaatattatgatgaagttgcattaccaaaa
ctggtaacagacttcggatcacttgaactttctccagttgatggccgtacactaactgac
ttcatgcatttaaggggactaaagatgcactctttgggtcgagtggttgaacttgcagag
aaacttccccatatacaatcactttgtatccatgagatggttactcgagctttcaagcat
gtacttaaagcggttgttgcctctgttgacaatatcgaggaattacctgcagcaatagct
gcatccctaaattttttacttggatgctgcgaaatggaagacgaccaagaattgaatgat
gaccatcttcttaaatttgaatggttacaaatatttctagccagaagatttggttggatg
cttaaagatgagttgcggcatgtgagaaagttatcaattctccgagggctttgccataag
gttggattagagatggtttcaagagattatgacatggaaaacccttacccattcaagaag
tatgatatcatcagcatggttcctgtgtgtaagcatgtaggatgctcttcagcagatgga
aggaatctattggagtcatctaaagttgctcttgataaaggaaaattagaggatgctgtt
aattatggaacaaaggcactagcaaagatgatggctgtttgtggtccctaccatcgaact
accgcaagtgcttacagtcttctagcagtagttctttaccacactggagactttaatcag
gcaactatatatcagcaaaaggctttggatatcaatgagagagaacttgggcttgaccat
ccagatacaatgaaaagctatggagatctttctgttttctactatcgtctccaacatgtt
gaattggctttgaagtacgtaaaccatgctctgttccttcttcattttacatgtggacta
tctcacccgaacacagctgcaacatatataaatgtagctatgatggaagagggcatggga
aatgtccatgttgctctcagatacctgcatgaagctctaaaatgcaaccaaagattatta
ggagcagatcatatacagacagctgcaagctatcatgctatagccatagctctttcgtta
atggaagcatattccctgagtgtgcaacatgagcaaactactcttaaaatacttcaagcc
aaacttggaccagaagatcttcgtactcaggatgctgctgcatggcttgaatactttgaa
tcaaaagctctggagcagcaagaagcagcaagaaatggaactccaaagccagatgcatcc
attgctagcaaaggtcaccttagtgtatcagatctccttgattatataagtcctgatcaa
gattctaaagggagtgacgcccagaggaaacagcgacgtgcaaaggttttgcagctaagt
gataaaagccatcaagaacaaggtgatgctatagtagatgatgacttgctctatgatggc
tcagaaaacactgcaggtacaaaagatggaaacacagaagtaaaagtcagcaaggtttat
cctgaagaacctgaagaaaatgatgatattactagatatgggctgaaagttgcatgtgaa
gttgtggaagaatttacttcagatgaagggtggcaagaagccaattcaaaaggacggtct
acaaaaacgcctggtcggaagtttggccggaggctaccagttcttgcaaaactaaacgtt
agcaatggtaaacattcaaattttaaagatatcatctacaggcgggacctcatttcacca
gagcaaaaagcaactccaaagaccaattcaaccgagttgtttccattgaagcagtcaaag
gctggttgcttgagttctggagaggattcagttaatgtgcgggcaaaagctcctgtttcc
aaggttcccaccagtccagcaactcttacttccctggcttcaaaatctgtttcttacaaa
gaagtagctctggcaccaccaggtaccattctaaaaccattactggagaaagtagaagaa
ttaaacgaggaaaaaactgaaatccagatccacaacattccacatgagatatcaaaggat
gaagaaagcagcaataactctgtagttgaagcaatcccaaaagatgttgaaatagaaggg
acgaatgaaaaaagcactcagatggagactactaccccaaaacttgaagaggtttcatgt
tcttctgatcaagtaaagccggtagaaacaaaagggagtaagctttctgctgcagctgaa
ccatttaatccagtatcactgtccatgcctcaccctttaaactcagtttctgtgacaagt
atatatgatgtaaatgtcagtcaaggcatgctagcagaacctgttattactccagttggt
gctagaattccttgtggacctagatcacctttgtatcatagaaacaattattctttccgc
atgaaacatggccattcgagatatcctactcctagcaaggaaagaggtaaatttggagct
ccaagaatgaacccacatgcacccgagtttgtacctgggagagcttggcaaacaaatcct
agtgatgcacattgtaccactcaaaccgagtcagattctgcgattgaaacaagtagggca
gaagaggagaggctggatgacaaatccaatactgaagttaaagatggtgtttcaaaaaag
agcttctctgggtctgagaagttagagcttgcaagacagatactgcttagcttcattgta
aagtcggtccggcataatatggatcctgtgggtgagcctgcagttagcgagaagaacttg
gagttttcagaaaattcttcagatgcaatagcaaatgacagtgcaattataaaaattctc
tatgacagtgagggaaagaaggacttggtttctcaatcctgtgatgtcaagcagccaaaa
acagcagcagatgaaaataagaaaaaaaatggggatggtgaaggatttatagttgttaga
aagaggagaagaaacaggcagcagtttacaaatagcgtaactgggttgtacaatcagcaa
tcaatctgcgcttctgttcgttaa
DBGET
integrated database retrieval system
