Alnus glutinosa (common alder): 133864239
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Entry
133864239 CDS
T10577
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133864239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133864239
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
133864239
Prokaryotic type
Archaeal type
TFB
133864239
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
DUF2387
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
133864239
NCBI-ProteinID:
XP_062156509
LinkDB
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Position
3:complement(1403593..1411051)
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AA seq
524 aa
AA seq
DB search
MKCPYCSLAQGRCATTSSGRSITECASCGHVIEERQSQPHHLFHLRAQDNPLCLVTPDLP
PVEAHHDEEDPFEPTGFITAFSTWSLEPSPLFLRSCLSFSGHLAELERTLETSSSSSSSS
SSSSTVVVDNLRAYMQIIDVASILGLDHEISDHAFQLFRDCCSATCLRNRSVEALATAAL
VQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLL
QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTE
VTLRKVYKELLENWDDLLPCNYTPAVPPERAFPTTVIASGRASAPKVDLVEVTPSSDRDK
QSEIKGNKTVECPDMGHPARAKEEAESRGNSHSASNPVLSRPPTFWQPQAPFVNSGPRTV
ADKNQNLSRGTDINELHSNHQDLERKVDQDTNHATTNSLKPNQLVSLPTSSGSSVSRQFW
PPSMSVPPPNVRFVQPPSVVSGYAEHQGAGSLNGTRNANQCGDT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtccgtactgctccttggcgcaggggcggtgcgccaccaccagctccggccgc
tccataacggagtgcgcgtcgtgcgggcacgttattgaggagcggcagtcccagccccac
cacctcttccacctccgcgcacaagacaaccctctctgcctcgtcacccccgacctgccc
cccgtcgaggcgcaccacgacgaagaggacccattcgagcccacaggcttcatcaccgcc
ttctccacctggtccctcgagcccagccctctcttcctccgctcatgcctctccttctcc
ggccacctcgccgagctcgagcgcactctcgaaacttcttcttcatcatcgtcatcttcc
tcttcatcttccacggtcgtcgtcgacaatctgagggcgtacatgcaaatcatcgacgtg
gcctccattctgggcctggaccacgagatatccgaccacgcgttccagttgtttagggat
tgttgctccgccacttgtttgaggaatcggagcgtggaggcgctcgccactgccgctctt
gtccaggccattagggaggcccaagagcccaggaccctccaggaaatttcaattgcagct
aatgtaccccagaaggagattgggaagtacatcaagatacttggagaagctctacaacta
agccagcccattaatagcaattccatatcggtccatatgccaaggttttgcacacttctc
caactcaacaaatctgcccaggagcttgcaactcacattggagaagttgttatcaacaaa
tgcttctgcactcggaggaatcctattagcatctctgcagctgctatttatttggcttgc
caattagaagacaaacgcaaaacccaggcagagatttgtaaggtgacaggcctcactgag
gtcactctccgtaaagtgtacaaggagctgttagagaattgggatgatttgctcccatgt
aattacaccccagctgttcctccagagagagcatttcccacaactgtgattgcttcaggc
cgtgcttcagcgcctaaagttgatttagttgaagtgaccccttcatcggacagagacaag
caatcagaaattaaaggtaacaaaacagttgagtgtccagacatgggccatccggcccga
gctaaagaggaagctgaaagtaggggtaactctcatagtgcctctaaccctgtgttgagc
cgaccacccacattctggcaaccccaggctccatttgtgaattctggtcccaggacagtg
gcggacaagaatcagaatctctctcgaggaacagacatcaatgaactgcactctaaccat
caagacttggagcggaaggtagatcaggatacaaatcatgcaactactaattccctaaag
cctaaccagcttgtgagtctcccaacttctagtggaagttcagtttccaggcagttttgg
cccccatctatgtccgtgcctcctccaaacgttcgatttgttcagccaccaagtgtagtt
tctggttatgctgaacatcaaggagctgggagcctaaatggaactagaaatgccaatcag
tgtggagatacctag
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