Alnus glutinosa (common alder): 133864349
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Entry
133864349 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133864349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aglu03041
]
133864349
Spliceosome [BR:
aglu03041
]
Common components
Common spliceosomal components
SR proteins
133864349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RNA_bind
RRM_3
RRM_5
RRM_fung
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133864349
NCBI-ProteinID:
XP_062156631
LinkDB
All DBs
Position
3:complement(8293419..8297026)
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AA seq
252 aa
AA seq
DB search
MRPIFVGNFGYDSRQSDLERLFGKYGKIERVDMKSGFAFVYFMDEHDAEDAIRGIDNRPF
GNDRRRLSVEWARGERGRPSDGSRSAANQRPTKTLFVINFDPKRTTVRDIERHFESYGKI
LHVRIRRNFAFVQFETQEDATKALDCTHMSKLLDRVVSVEYALRDDDEKGDRYYDSPRRG
GYGGRGVSPYRRSPSPVYHRRPSPGYGRPRSPVYDRYNGPTFDRRRSPDYGRNRSPEYGR
YRSRSPLRRSRT
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgattttcgtgggcaacttcgggtacgattcccgccagtctgacctggagcgt
ttgttcggaaagtatgggaagatcgagcgtgtggacatgaaatctggttttgcttttgtt
tattttatggatgagcatgatgctgaagatgctattcgtggcattgataataggccattt
ggtaatgacaggcgtaggctctcggtggagtgggctaggggtgaacgaggtcggcctagc
gatggatctaggtcagcggcaaaccagaggcctactaaaaccttgtttgtaattaacttt
gatccgaaacgtacaactgttcgtgatatagaaagacactttgaatcttatggaaagatc
cttcatgttcgtattcgacggaactttgcattcgtacagtttgagactcaagaagacgct
accaaagccctcgattgtactcacatgagcaagctattagacagggtagtatccgttgaa
tatgctctgagggatgatgatgagaagggagacaggtattatgatagccctagaagagga
gggtatggtgggcgtggggttagtccctacagaagatcaccaagtccagtgtatcacagg
cgcccaagtcctggttacggtcgtccccgcagccctgtctatgacaggtacaatggccca
acatttgacaggcgccgtagtcctgattatggtaggaacaggagtccagaatatggccga
taccggagccggtcacctcttagaaggtcaagaacttga
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